Detail



ID : Ahg478442

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478442|fgenesh2_kg.3__1143__AT3G10980.1
Sequence
CCCCAACGAC CAATCTTATG TTCCATCAAT TTCACACCAG AAGCCTTACC TTTTAAATTC TTAGTCTGAG TAACTTTCTC TGTTATTGCA GCTGAATTTT AAAAATTCGA TTCAACGAGT TTTCCTGTTA AGGGTTTGAT TCCTTTTCTG TTCATCTTTG TTTAGTCAAA TCTGAAGACT TGTTTGGTTT GGTTCCAATG TGCTGAGAAG AAGCTTCGTT GGCAAAAGTC GAATCTTTTC TTCTTTTTTT TTTCTGGGTT TTTATATTCT TTGCCAACAA TGTTTAAGCT TGCTAAGCAT ATATGCCTTT GAGTAGCTGC TGCTTTATTC CTACAAGATT TGATCTTTAA GAGAGAGAAT GGGATCGAAT TGTGATGGGA ATTTGAAAGC AGAGATTGAA GAATCTAATG GTTCTTCTGG CAAAAAAACT AGGGTTCCTC CTTGTCCTCT TGATGTTTCT ACATCTAGAA GAACTTTGAT TGGTGATGGT AAACCTAGGA GATGGTCTAT TAGTGCTTTG CCTGATGCTT CTAGTAGAAT CCAGCTTCTG AAATTTGGTT CTCCTTCTGC TAAATTCAAG AAAATGGCTG AGGATAGAGA CGAGGTTTCG CGGTCAGTGA AGAGCTCAAG TAGCGGCAGC AGTCATAATT TCAGGGAAAG AATCAGTGGT GTGCTTCACC GGAATATCGA TTGGAGTTCT CTGATGAAAA TGGGGAAAGA ATGGATTAGG AATCCTATTA ACATGGCTCT CTTTGTGTGG ATACTTGTTG TTGCAGTCTC TGGTGCTATT CTCTTCATGG TTATGACTGG TATGTTGAAT CATGCTTTGC CTAAGAAGTC ACAGAGAGAT GCTTGGTTTG AAGTTAACAA TCAGATCCTT AATGGGTTGT TTACTTTGAT GTGTCTTTAT CAACATCCGA AACGGTTTTA TCACTTGGTG CTTCTTTGTA GATGGAAGCA GGATGATATT ACAAAGCTTA GGAAAGCTTA TTGCAAGGAC GGGACTTATA AGCCGAATGA ATGGATGCAC ATTATGGTTG TTGTCTTTTT GCTTCACTTG AACTGTTTTG CTCAGTACGC GCTTTGTGGT CTTAATGTTG GATACAGGAG ATCAGAGAGA CCTCCCATCG GAGTCGCTAT ATGTATCTCT GCTGCGATTG GAGCTCCTGC GGTTGCGGGT TTGTACACTA TACTAAGTCC ACTTGGGAAA GATTATGATG ATTCAAATGA AGACGAGGAG AATCAACTGC AGCAACGTGA AGAAGGGTCT GTGAATCGCC GGTTTACTTT AGAGAGGAGG TATTCGTTTG CTTCTGCTTC CACGGGGGTT GGGGATGGAA TGGTTCCGGT GAGTGATCCT CAATGGAGTG GTGGAATTTT GGATATTTGG GATGATATTT CATTGGCTTA TCTTTCTCTT TTCTGCACGT TCTGTGTCTT TGGATGGAAT ATGGAGAGAG TTGGGTTCGG GAATATGTAT GTTCACATAG CGACGTTTAT TCTCTTTTGT TTGGCACCTT TCTTTATATT CAACTTAGCT GCGGTTAATA TCGATAATGA GACGGTTAGG GAGGCCCTTG GGATATCTGG AATCCTTCTT TGTTTGTTTG GTTTGCTCTA TGGTGGATTC TGGAGAATTC AGATGAGGAA AAGATTCAAA TTGCCGAGTT ATAAGTTCTG CTTCGGTAGA GCCGCGATTG CTGATTGTGC GCTCTGGTTA TGTTGTTGCT GGTGCTCTTT AGCACAAGAA GTTAGGACTG CAAACGCTTA TGAGATAGTG GAAGACAAAT TCTGCCAAAG AAAAGAAGAG AAGAATTTGG CATCTCCGAA TTTGGTATCT CCTATGCCTC GTGAGGACGG TGTCTTTGAT CCTCGGTTTG GTCTCGGGAG CTCCCCTAAG AACATAAGTG GAGCTAGTTC TCCTAGCCCG AGCAGGTTTT GGAAAGAGGT ACATAGTCCA AATATACAGA CACCTAGAGA GAAAGAAGAA GGTAAAAGCG AGGTTGCTCT GACTCCACCT TCTCCTCTGT CTATACACCG AGAAGCTTGA 
Length2050
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4148962.. 4151082
Download Sequence
A.thaliana
AGI-codeAT3G10980.1
DescriptionPLAC8 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.7083 Ahg487534 sorting nexin 2B
24.0832 Ahg921142 NAD kinase 2
29.4109 Ahg481209
32.0624 Ahg491819 protein kinase family protein / WD-40 repeat family protein
32.6803 Ahg491498 S-domain-2 5
34.7851 Ahg485532 tetratricopeptide repeat (TPR)-containing protein
37.9473 Ahg474199 OTU-like cysteine protease family protein
48.2597 Ahg495004 PAS domain-containing protein tyrosine kinase family protein
59.1608 Ahg472201 ATP-dependent protease La (LON) domain protein
60.2495 Ahg933859 beta galactosidase 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression