Detail



ID : Ahg477706

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477706|fgenesh2_kg.3__407__AT3G04500.1
Sequence
CGATTCGGCG TTTAGCTTCT CCGATGTCAA TCCCACCATC TTCAGCTTCT TCTTCTTCAT CTTCCTCGTC TCAGTACACA TACGCTGCTA ATTCTTACTA TTCCGCTCCG TATCAGCCTC CACAGCCTTA CGCGGCGGCG CCTTCGCCTG CTGTACCGGC GCCGGTGGCA TCCATTCCCG GAGCTACGGT CTATCCTCAG CCTGTTGGAC CGGTTCCTGC CGTATACGCT TACCCACAGT ACCAGCAGGC ACATCAATTG TTTCAGAGAG ATGCACAGAC AATTACGCCA GAAGCTCTTG AGAATGTAAA AGCTGCTTTG GCAAGTAGTG AAACCGAACA CAAAGCAGAA ACTAAAAAGA GAGCCATTCC TCGTAAAGCT GCTGGACAGT CTTGGGAGGA TCCTACTCTA TCAGAGTGGC CAGAAAATGA CTATCGCCTG TTCTGTGGTG ATCTTGGGAA TGAAGTGAAT GATGATGTTC TTTCCAAGGC ATTTACTCGA TTCCCCACCT TCAATATGGC CAAGGTCATT AGAGATAAGC GGACTGGTAA AACCAAGGGT TATGGGTTTG TGAGTTTCTC AAATCCTGCG GATCTAGCAG CAGCCCTAAA AGAAATGAAT GGTAAGTATG TTGGAAACCG TCCTATAAAA CTACGAAAGA GCAGCTGGAA AGAGAGGACA GACCAGGAGG CTGCTGAAAG ACAAAAGCAT CACAGCAATA AGAAGCAAAA AACTATGAAG AAGAGCGTAC TTCACAAGTG ACGATCTCTT TTATTTTTGT GGCTTTAACT TTCTAAACCT GTTACTCAAA AATATATAGT TTTGTTGAAA ACTGTATCTA TGTTTAGCCC CAACCGGTGG TATTTACTTT ATGAAAACGT GTTTCCTTAA TAAGCTCGAG CACAAACTTC TCTTACATCT TTTTAGCTCC ATTAACGACC AAGTGGTCTG AGCATAATAT TACAAGAAAA TCAA 
Length974
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1448466.. 1450494
Download Sequence
A.thaliana
AGI-codeAT3G04500.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13 Ahg477260 CASC3/Barentsz eIF4AIII binding
20.3715 Ahg487615 conserved peptide upstream open reading frame 16
24.1247 Ahg490274 Small nuclear ribonucleoprotein family protein
27.7489 Ahg937917
31.1288 Ahg486936 HEAT repeat-containing protein
36.8239 Ahg495151 ubiquitin-conjugating enzyme 27
43.8634 Ahg474479 mitogen-activated protein kinase 18
44.0341 Ahg479047 Phox (PX) domain-containing protein
49.1732 Ahg480677 VPS35 homolog A
53.5817 Ahg476752 ATPase, V1 complex, subunit B protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression