Detail



ID : Ahg487817

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487817|fgenesh2_kg.6__951__AT5G09920.1
Sequence
TTTAGGTTTC GATTTCCCTC CTTGGTAATT GCCATGTCCG GAGAAGAAGA AGAGAACGCC GCCGAACTCA AGATCGGAGA TGAGTTTTTG AAGGCAAAGT GCTTAATGAA TTGTGAAGTC TCTTTGATTC TTGAGCACAA GTTTGAACAG CTTCAACAAG TCTCAGAGGA TCCTATGAAT CAAGTTTCTC AAGTGTTTGA GAAGTCCTTG CAATATGTGA AGCGATTCAG CCGGTACAAG AATCCAGACG CTGTTAGACA AGTTCGAGAA ATACTGAGCA GACATCAACT CACTGAGTTT GAGCTATGTG TTCTTGGCAA TCTCTGTCCT GAAACTGTTG AAGAAGCAGT GGCAATGGTT CCTTCTCTTA AGACAAAAGG AAGAGCTCAT GATGATGAAG CAATTGAGAA GATGCTTAAT GATCTCTCTC TTGTCAAGAG ATTCGAGTAG TGCAGAAGAT TCTCAAGATC TTAGACTAAG AACATTTGGC AGGATGCTTT ACTTGCCTTC TCGCTGATCT GGAGTTAATT TTCCATGTCT GAAATTATAA AGCTTTAATT TTAAATGAAT GTAATTTACA ATGGATGATC CAAGCTTTCA ATGAAATATA CCATTTCTTT TTCACT 
Length626
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3769201.. 3770575
Download Sequence
A.thaliana
AGI-codeAT5G09920.1
DescriptionRNA polymerase II, Rpb4, core protein
TAIR curator summaryNon-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4)
Alias[ATRPB15.9][NRPB4][RPB15.9][RPB15.9.9]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg486610 Protein of unknown function (DUF3245)
10.583 Ahg477043 UDP-Glycosyltransferase superfamily protein
16.4317 Ahg324433 O-acetylserine (thiol) lyase isoform C
23.4307 Ahg918742 transcription regulators
25.6125 Ahg947127 Haem oxygenase-like, multi-helical
27.1662 Ahg493763 pfkB-like carbohydrate kinase family protein
30.0333 Ahg931448 casein kinase I-like 5
31.1288 Ahg491819 protein kinase family protein / WD-40 repeat family protein
36.6606 Ahg325480 vacuolar protein sorting-associated protein 20.2
37.1483 Ahg905049 Alpha amylase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression