Detail



ID : Ahg487908

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487908|fgenesh2_kg.6__1042__AT5G10740.1
Sequence
TATTTTTAGC AAATGAATCC ATTTGTTCGC CGGAATATGC TCCCTTCTCT TAACGTCGAT CACCTGTTTT TTTTCTCAAG TAGGAATCAA CCTTGAATCT CCCATCATTC TCACTTCTCT CTTCTAATTC TTTCATGGAA TTTTGAGGTT AGACGAACAT TCCGGGCATA TTATCTGTTG ATTCGAAGAT TAGAGTTTGA AATTTCTGAA GAAATATGGG ATATCTGGAC TTGGCCTTGT CGTATTCCAA CCAGCCGCAG ACTGTTGACG CTCCAGCGAG CGGAGGAGGT CTCAGCCAGA ATGGAAAATT TAGCTATGGA TATGCAAGCT CAGCTGGGAA GAGATCATCT ATGGAAGACT TTTTTGAGAC TAGGATCGAC GGTATCGATG GAGAAATCGT TGGTCTCTTT GGAGTTTTTG ATGGTCATGG TGGAGCCAGA GCAGCTGAGT ACGTGAAGCG TCATCTTTTC AGTAATCTCA TCACCCACCC AAAGTTTATC TCTGACACCA AATCAGCTAT AACTGATGCC TATAACCATA CAGACTCAGA ACTTCTTAAG TCAGAAAATA GTCACAATAG AGACGCTGGT TCGACTGCGT CTACAGCTAT TCTTGTTGGT GACCGCTTAG TTGTTGCAAA TGTTGGTGAT TCAAGAGCTG TTATCAGCAG AGGCGGAAAA GCCATTGCTG TGTCAAGGGA CCATAAACCT GACCAAAGTG ATGAACGTGA AAGGATTGAG AATGCTGGTG GATTTGTGAT GTGGGCAGGA ACTTGGAGGG TTGGAGGAGT TCTTGCAGTT TCTCGTGCGT TTGGTGATCG GCTTCTGAAG CAATATGTTG TTGCTGATCC AGAAATCCAG GAAGAAAAGA TTGATGATTC CCTTGAGTTT TTGATCCTAG CAAGTGATGG ACTGTGGGAT GTTTTCTCTA ATGAGGCAGC AGTTGCAATG GTTAAGGAAG TTGAAGATCC AGAGGAGTCA GCGAAGACAC TTGTGGGTGA AGCAATAAAG AGAGGAAGTG CAGACAACAT CACATGTGTT GTCGTTCGTT TCTTGGAGAA GAAGACAGCT TCATCAAGCC ACATTAGCTC ATCCTCCTCC AAGGAAGCCA ATGAAATGCC GCCACTTGGA GACCTCGCTA TCTCGTCCAA TGAAGCTACC CAAGTCCAAA TCGACTCAGA GAATATCAGC TCAGGGAACA AACCAGAGAA TGTAATGAAT CGAAAACCTG TCCCTGCAAG CAGCTTAACC GATGAAGTGA CCGTTAATGG TTTAGAGAAT AAACCAGGGA AAACAGGGAA TCGAAAACCA ACTGATGCAG TGACCGACAA GGTATAAGTA GCGATTCCCT CTATTCTCTA GGAACAAAAG CGTTCTCTTC CCTCAAACAC GGCAAACAAA CTTACTGATC GTTGATCTCG TTTGTATTTA CTATTTAGGA TTGAAGATGT TGTGTATATA ATATACATGC ATCGATTTTT GTATTTGTTT ATGTGTAAAT GTTTAAAAGT TCATGATAGT TTATTC 
Length1526
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4131727.. 4134346
Download Sequence
A.thaliana
AGI-codeAT5G10740.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.4914 Ahg476189 F-box family protein
20.199 Ahg479152 response regulator 1
23.7697 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
28 Ahg487227 RING/U-box superfamily protein
28.6356 Ahg909050 alpha/beta-Hydrolases superfamily protein
28.8271 Ahg484195 sucrose transporter 2
29.7993 Ahg475258 NAD(P)-linked oxidoreductase superfamily protein
30.3974 Ahg492484 AMP-dependent synthetase and ligase family protein
35.4683 Ahg492857 VACUOLAR SORTING RECEPTOR 7
40.6202 Ahg324615 DYNAMIN-like 1B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression