Detail



ID : Ahg487947

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487947|fgenesh2_kg.6__1081__AT5G11150.1
Sequence
TGCGCCTGAT ATTTTCAAAA TTCAATTTTT TTCCACACTG TAAAGCGGGC TTCTCAAAAT CATTGCAACA ATTCAATTTC AGATGTATGG TGGTGAGATG CTTTGATTAC AAGTCGGCGT TGAACAATTC TCCGATTTTA CACTCCAATC GAATCATCGT TGTTCTCAAG ATCTGAGATT TACAGAGAGA AGTGAGCTGG AGTAGATGGC GATCATATTT GCGTTGGTGG CTCGAGGAAC GGTGGTGTTA TCGGAGTTTA GCGCTACTTC GACTAACGCT AGCTCAATCG CGAAGCAGAT TTTGGAGAAG TTGCCTGGAA ACGATAGCGA TAGCCATATG TCTTACTCTC AGGATCGGTA CATCTTCCAT GTGAAACGAA CCGATGGTCT TACCGTTCTC TGTATGGCCG ATGAAACCGC CGGAAGGAAT ATTCCGTTTG CGTTTTTGGA TGATATTCAT CAGCGATTTG TGAGAACGTA TGGCCGTGCG ATTCATTCCG CTCAAGCTTA TTCCATGAAT GATGAATTTT CAAGAGTTGT GAGTCAGCAG ATGGAATACT ATTCCAATGA TCCAAATGCA GACAGGATGA GCAGAATTAA AGGTGAAATG ACTCAGGTTC GAAATGTGAT GATTGAGAAT ATTGATAAAG TCTTGGATAG AGGGGAGCGC TTGGAGTTGC TGGTTGATAA AACCGAAAAT ATGCAAGGCA ACACTTTTCG TTTCAGAAAG CAAGCTCGCC GTTACAGAAC CATTATGTGG TGGAGGAATG TCAAGCTTAC GATTGCTCTG ATACTTGTAC TCGCATTGGT TGTATACATC GCGATGGCCT TTGTTTGCCA TGGGCCAAGT CTTCCTTCAT GTTTCAAGTA AGAAGACAGT ATCTTATCTT CACCATTCCC TTCTTGGGAA TTTATCAGAC TCTGGTTCGA TTTTGGAATG TGAGATATGC CTTGTGTAAA ATGTGTGTTT ATGTGCTCTT TCAAATAGCA GCTTCTGCTT ATTGCTTTGA ATTATTATTT GTAAGTGTGA TATTTCACTG TTAATGATCA TCCCCTGTCT GTTTGCAATT TATGCTGCGG CGTTAAGATG ACGTTTTTAG CTTTTGCTGG ATCTGTGAAG AATTT 
Length1125
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4302955.. 4304737
Download Sequence
A.thaliana
AGI-codeAT5G11150.1
Descriptionvesicle-associated membrane protein 713
TAIR curator summaryMember of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.
Alias[ATVAMP713][VAMP713][VAMP713][vesicle-associated membrane protein 713]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg492278 arginine/serine-rich splicing factor 35
10.7703 Ahg478095 CONSTANS-like 9
12.2474 Ahg474695 isocitrate dehydrogenase
13.2288 Ahg475826 Major facilitator superfamily protein
13.784 Ahg923642 Pyridoxamine 5'-phosphate oxidase family protein
21.5407 Ahg489950 translation elongation factor Ts (EF-Ts), putative
22.1811 Ahg928970 cystatin B
22.5167 Ahg473369 acyl-CoA-binding protein 6
22.8035 Ahg491493 Tetratricopeptide repeat (TPR)-like superfamily protein
26.1534 Ahg925737 glutamate decarboxylase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression