Detail



ID : Ahg928970

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928970|scaffold_301427.1
Sequence
TTTAGGGTTC TGCAACGACG ACATGGCTTT ACTCGGTGGC GTTCGCGATG TTCCTGCTAA CCAGAACAGT GGTGAGGTCG AGAGCCTCGC TCGTTTCGCT GTCGATGAGC ACAACAAGAA AGAGAATGCA CTTCTTGAGT TTGCTAGAGT GGTGAAAGCT AAAGAACAAG TTGTAGCCGG AACAATGCAT CACCTGACTC TGGAGATTCT CGATGCAGGG GAGAAAAAGC TTTACGAAGC CAAAGTGTGG GTGAAGTCAT GGTTGAACTT TAAGGAGTTA CAGGAGTTCA AGCCTGCCGC CAGTGATGCC CCTGCAATCA CTCCCTCCGA TCTTGGCTGC AAACAAGATG AACATGAATC TGGATGGAGG GAAGTTCCAG GAGATGATCC AGAAGTGCAG CACGTTGCTG AGCATGCTGT CAAGACCATC CAGCAGAGGT CTAACTCCTT GTTCCCTTAT CAACTTCTGG AGGTTGTGCA TGCTAACGCT GAGGTTACCG GCGAGGCTGC CAAATACAAC ATGCTGCTGA AGTTGAAGAG GGGAGAAAAA GAGGAAAAGT TCAAGGTGGA AGTTCACAAG AACCATGAAG GTGCTCTTCA CTTCAACCGC ATGGAGCAAC ACCATGACTA GTCCCTCTCC CCTGTTTATG T 
Length651
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4728225.. 4729455
Download Sequence
A.thaliana
AGI-codeAT3G12490.2
Descriptioncystatin B
TAIR curator summaryEncodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).
Alias[ATCYS6][ATCYSB][CYSB][ARABIDOPSIS THALIANA PHYTOCYSTATIN 6][cystatin B]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg474716 dehydrin family protein
4.79583 Ahg490342 sucrose synthase 3
7.2111 Ahg496297 CCT motif -containing response regulator protein
7.74597 Ahg927111 alcohol dehydrogenase 1
8.77496 Ahg474101 abscisic acid responsive element-binding factor 1
9.79796 Ahg488410 reversibly glycosylated polypeptide 2
10.5357 Ahg488056 cystatin-1
10.583 Ahg487123
10.9545 Ahg492278 arginine/serine-rich splicing factor 35
10.9545 Ahg491275
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression