Detail



ID : Ahg488037

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488037|fgenesh2_kg.6__1171__AT5G11950.1
Sequence
TTCTTTTTTT TTTTTGTTTG ACGGCTTGAG GGAATACGTT GATTTTGTAG ATTTTTATCC ACTAATGGAA GATAATAACC AGCGACGCAG ATTCAGAAAA ATTTGTGTGT TTTGCGGAAG CCACTCTGGT CACCGAGAAG TTTTCAGTGA TGCTGCCATC GAACTCGGCA ATGAACTCGT GAAGAGGAAG ATAGATTTGG TTTATGGAGG AGGAAGTGTT GGATTGATGG GTTTGATATC CAGGAGAGTC TATGAAGGTG GTTTCCATGT ACTCGGGATC ATTCCCAAAG CTTTGATGCC AACTGAGATA TCTGGTGAGA CTGTGGGAGA TGTAAGAGTT GTTGCAGACA TGCATGAGCG AAAGGCTGCA ATGGCACAGG AAGCTGAGGC CTTCATTGCA CTCCCTGGAG GTTATGGAAC AATGGAGGAG CTGTTGGAGA TGATAACATG GTCACAACTT GGTATCCATA AGAAGACGGT TGGTCTACTG AATGTTGATG GATACTATAA CAATTTGCTT GCTTTATTTG ACACCGGTGT CGAAGAAGGT TTTATCAAGC CAGGTGCACG TAACATTGTG GTTTCTGCTC CAACAGCCAA AGAGCTTATG GAGAAGATGG AGGAATATAC TCCTTCACAC AAGCAGGTTG CATCGCACGA AAGCTGGAAA GTTGAAGAAC TCGGAGATTA CCCGGGACTA CAAAACAAGC CGCAATAAAA TTAGCATAAG CTACTTCCAT TTCAAGTTTA GCCTCTAAAT TAATTGCTGA ATCCACAATG TGTATAAGAA AACTCAAATC TTGTTGCAAT ATGAAACAGC ACATTGGGTT CCCAAAATGA AAGTGTTGCT GATTATGT 
Length858
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4671441.. 4673408
Download Sequence
A.thaliana
AGI-codeAT5G11950.1
DescriptionPutative lysine decarboxylase family protein
TAIR curator summaryEncodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.
Alias[LOG8][LONELY GUY 8]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg496670 beta-D-xylosidase 4
6.78233 Ahg486874 Leucine-rich repeat protein kinase family protein
7.48331 Ahg940836 sterol methyltransferase 1
19.4422 Ahg484388 cytochrome P450, family 71, subfamily B, polypeptide 22
19.6723 Ahg483991 Major facilitator superfamily protein
20.3961 Ahg480944 Arabidopsis phospholipase-like protein (PEARLI 4) family
24.2899 Ahg474176 10-formyltetrahydrofolate synthetase
26.7395 Ahg488259 Proteasome component (PCI) domain protein
28.5657 Ahg486762
29.189 Ahg482558 TPX2 (targeting protein for Xklp2) protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression