Detail



ID : Ahg488059

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488059|fgenesh2_kg.6__1193__AT5G12170.2
Sequence
AAAGGCAAAG TCCAAGTCAG CAACTCACTT CCGTCTCTCT CTCCCCCTCA AAACCAGTCT CATTCGATCT CTAATCCACC ATGGCAACGA CTTCTCGTCG GTTTACCACC GGTTTAACCG CCTCGATCAC CTTGGTCGAA TCCCATTCCG CAAACCGACC TCAGTCCATC TCCCTCATCC GTCGAAACCA CACCGATCCT CGTCGTCTAC CGTCGATCCT TCCAAGTTCC AGGCGGTGGA TTATTGAAGC GGTGTCACCA GCGAGATCCT GGGATGGATC TGATTACGGA GCTGAGGCGG AGATTAAAAA GCCAGGCGCG TGTGGTTACG CGATCGGCGA TAACGAGATG GAAGGGAGCA GTACTGTCCA TGTGATCGAC GGAGAGCATG TTAAGACGGC GGAGATAGTG ATTTGGGCGG CGGCTACGGC GGCGTTTGGC GTCGGAAACA GAGTGATGTA TAAGCTCGCG CTAGTTCCAC TCAAGGAGTA TCCTTTCTTC CTTGCGCAAC TCTCCACCTT CGGGTATGTA GCTGTATATT ATACTATCTT GTATTTTCGA TATCGTGCTG GAACTGTCAC AGAGGCAATG CTCTCGGTGC CAAAATCTCC ATTTTTAATT GTTGGCATCT TAGAGGCTCT AGCTGCAGCT GCTGGCATGG CAGCCGCAGC GAATCTTTCG GGGCCATCTA CTACAGTTTT ATCTCAGACA TTTCTTGTCT GGCAAATTTT CTTCTCCATT ATTTTTCTCG GGAGGAGATA TAGCGTAAAC CAAATACTCG GATGCACTCT TGTAGCTCTC GGTGTAATCG TCAGTGTGGC AAGTGGATCA GGTGCTGCTC ATTCATTGAA GGAAGCCGGA GTATTATGGA TTCTTCTAAC GGTCCTCTCT TTCTTGCTTC AAGGAGCAGG TACAGTATTG AAGGAAGTCA TCTTTATAGA TAGCCTAAAA CGATTAAAGG GTGCTTCACT CGATCTATTT ATAGTAAATT CATATGGTTC AGCTTTCCAA GCCATCTGCA TTGCGTTGCT TCTTCCATTT CTTTCAAAAC TTTGGGGCAT ACCGTTTAAC CAACTCGGTA CCTACCTAAA AGATGGCGCA GTTTGCTTTC TCAACCACGG GACAATAACA AAAGGATGTG ATGGGGCACC GTTTTTGCCT CTATTGTTTG TGACAATGAA CATTGGCTAT AACATTGCTC TTTTAAGACT CCTCAAGATT TCATCGGCCG TGGTTTCGTG TCTTGCATCA ACAGTTTCAG TGCCAATTGC AGTGTTTCTG TTCACAATGC CATTACCGTA CCTTGGAGTT GCATCATCAT TACCAAAAGG GTTCATGGGA GGAACAGTCA TACTTGTATT GGGAATGATT CTTTACAGTT GGACACCACA AGGAGCTAAC TCTTCTCATA CTGATACAGT CATTCCTTCA CCTCCTCCCA CCTAGACAGG GCTTAATTAA GGGTTTTTGC TTTTATTAAA AGATTTGAGA GATTTATGCA AATTCGGTTT GTACGTATCA AGATAAAATA ATATTTGATC ATATAATGTT AATGGAAAAG TTGACATTTC TTGTGTGTTG CGTTCAGATT AGATTCCTAG TTCATTAGTC AACAGCT 
Length1617
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4752878.. 4756633
Download Sequence
A.thaliana
AGI-codeAT5G12170.2
DescriptionCRT (chloroquine-resistance transporter)-like transporter 3
TAIR curator summaryEncodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.
Alias[CLT3][CRT (chloroquine-resistance transporter)-like transporter 3]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg476384 Protein of unknown function (DUF1677)
10.9087 Ahg488679
12.2066 Ahg484590 nodulin MtN21 /EamA-like transporter family protein
14.8324 Ahg490899 Integrase-type DNA-binding superfamily protein
18.7083 Ahg934176
19.0788 Ahg926057
21.1424 Ahg482040 Plant protein of unknown function (DUF828)
23.7697 Ahg494441 solute:sodium symporters;urea transmembrane transporters
24.1661 Ahg352314 Copper amine oxidase family protein
24.9199 Ahg944000 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression