| Annotation |
|---|
| Description | jgi|Araly1|488387|fgenesh2_kg.6__1521__AT5G15410.1 |
| Sequence |
GAGAGGTACG TATCACACAC AACTCTTGCG CCTTTGCCTC TCCAATCACT CCCTGCAAAA TCTTCTCTCC CTCTCCCATG GTGGTTCCTC TGTTTCAATC ATGCCCTCTC ACCCCAACTT CATCTTCAGG TGGATTGGAA TGTTTTCCGA GAAATTCCGT CGACAAACGA CTGGAATCGA TGAAAACAGT ATTCTCCAAA TCAACGGTGG AGATTCGAGC AGCAGCGGCA GCGATGAGAC GCCGGTGCTA AGTTCCGTCG AGTGTTACGC CTGCACACAA GTAGGCGTCC CAGCTTTCCA TTCAACTAGC TGCGATCAAG CTCACGCGCC GGAGTGGCGT GCCTCCGCCG GCTCTTCCTT AGTTCCGATC CAGGAAGGAT CCGTCCCTAA CCCAGCCCGA ACCCGATTCC GACGTCTCAA AGGTCCGTTC GGTGAAGTTC TCGATCCCAG GAGCAAGCGC GTGCAGAGAT GGAACCGCGC GTTGCTTCTA GCTCGCGGGA TGGCTTTAGC TGTGGATCCG CTCTTCTTCT ACGCGCTTTC CATCGGCCGA ACCACCGGAC CGGCGTGTCT TTACATGGAC GGTGCCTTCG CCGCGGTGGT AACGGTGCTC CGCACGTGTC TCGACGCTGT TCATCTTTGG CACGTGTGGC TTCAATTCAG ATTGGCTTAC GTCTCGAGAG AGTCGCTTGT CGTTGGTTGT GGCAAGCTCG TTTGGGATCC ACGCGCCATC GCGTCTCACT ACGCACGCTC TCTCACTGGC TTCTGGTTTG ATGTTATCGT CATCCTCCCT GTTCCTCAGG CGGTGTTTTG GTTAGTTGTG CCGAAACTGA TAAGAGAAGA GAAGATTAAG CTGATAATGA CGATTCTTGT GCTAATATTC TTGTTCCAGT TCCTCCCCAA GATTTATCAC TGCATCTGCT TGATGAGAAG GATGCAAAAG GTCACTGGTT ACATTTTTGG GACTATTTGG TGGGGTTTTG CTCTTAATCT CATTGCATAT TTCATCGCTT CTCATGTCGC TGGGGGATGT TGGTATGTTC TCGCAATACA GCGTGTTGCT TCTTGCATAA GACAGCAATG CATGAGAACC GGGGATTGCA ATCTGAGTCT GGCTTGCAAA GAAGAGGTCT GTTACCAATT TGTGTCACCG ACAAGCACAG TTGGATATCC ATGCTTATCT GGAAACCTTA CCAGTGTGGT CAATAAGCCT ATGTGCTTAG ACTCTAACGG ACCATTCCGA TATGGTATCT ACCGTTGGGC ACTTCCAGTC ATCTCCAGCA ACTCTCTTGC GGTTAAGATC CTTTACCCCA TCTTCTGGGG CCTAATGACT CTCAGCACAT TCGCAAATGA TCTTGAGCCC ACAAGCAACT GGCTCGAGGT TATTTTCAGT ATAGTTATGG TCCTAAGCGG GTTATTACTC TTCACGCTAT TAATCGGAAA CATTCAGGTG TTTTTGCAAG CGGTAATGGC GAAAAAAAGG AAAATGCAGA TAAGGTGTAG GGATATGGAA TGGTGGATGA AACGTAGGCA GTTACCTTCC CGGTTAAGAC AGAGGGTTAG GCGATTTGAG CGTCAGAGAT GGAATGCCTT GGGTGGAGAA GATGAGCTAG AACTTGTACA AGATTTACCT CCGGGTCTTC GAAGAGATAT CAAACGATAT CTTTGCTTTG ATCTCATTAA CAAGGTGCCA CTGTTCAGGG GCATGGACGA CTTGATCCTC GACAACATTT GCGATCGGGC TAAGCCTCGC GTCTTCTCTA AAGACGAAAA GATCATTCGT GAAGGAGATC CTGTACAGAG AATGATATTC ATCATGCGTG GGCGAGTTAA ACGTATCCAG AGCCTAAGCA AAGGCGTGAT AGCCACTAGT ACCCTCGAAC CAGGGGGTTA CTTGGGTGAC GAGCTACTCT CGTGGTGCCT ACGTCGCCCG TTTCTGGACC GTCTACCCCC TTCGTCAGCA ACATTTGTCT GCCTAGACAA CATCGAGGCA TTCTCCCTCG GATGCGAAGA TCTTAGGTAC ATTACCGACC ATTTCCGTTA TAAATTCGCA AACGAGCGGC TCAAGCGGAC CGCAAGATAC TATTCCTCAA ATTGGAGGAC GTGGGCAGCC GTGAATATTC AGATGGCGTG GCGCCGATGT AGGAAAAGAA CCCGTGGTGA AAACATCGGC GGTTCGATGA GTCCTGTGTC GGAGAATAGC GTTGAAGGTA ACAGTGAACG CCGGTTACTT CAGTATGCGG CTATGTTCAT GTCCATTCGA CCTCATGATC ATCTCGAATA ATAAAAAAGA AGTTCCAATA TTTATCGGTC CAAATTGTTT GTTCCCATTG TTCATCCTCA ATTGTTTACC TTTACT |
| Length | 2356 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6025326.. 6028854 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G15410.1 |
| Description | Cyclic nucleotide-regulated ion channel family protein |
| TAIR curator summary | 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens. |
| Alias | [ATCNGC2][CNGC2][DND1][CYCLIC NUCLEOTIDE-GATED CHANNEL 2][CYCLIC NUCLEOTIDE GATED CHANNEL 2][DEFENSE NO DEATH 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg919597 | fatty acyl-ACP thioesterases B |
| 4.89898 |
Ahg477961 | O-acetyltransferase family protein |
| 13.0767 |
Ahg473078 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 20.4939 |
Ahg480634 | Auxin efflux carrier family protein |
| 25.0998 |
Ahg938912 | pectin methylesterase 61 |
| 28.8617 |
Ahg487306 | Cellulose synthase family protein |
| 31.7017 |
Ahg920044 | nitrate transporter 1.1 |
| 32.4037 |
Ahg491143 | plasma membrane intrinsic protein 3 |
| 37.3095 |
Ahg478916 | Uroporphyrinogen decarboxylase |
| 37.47 |
Ahg487652 | porphyromonas-type peptidyl-arginine deiminase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|