Detail



ID : Ahg478916

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478916|fgenesh2_kg.3__1617__AT3G14930.1
Sequence
TCTTCAAACT CTTAGGTTCT TCTCTAATTG AAAATGAGCT TATCATCGCC AACCAGTACT TGTAGCTCGT CGAGATGTTA CTCCTCGGGA TTGTCGTTGC CGATTGGATT TCGATCGAAT CCCATTAATG TTGGATTGGT TTGTTACCCA AAAAGACACA ATATTGCTGC TCGGAAGTTC GTCGTGGCTT GCTCCTCCTC CTCTTCTGAT CCACTTTTGG TTAAGGCTGC GAAAGGGCAA GCCGTGAGTC GTCCTCCAGC TTGGATGATG AGGCAAGCAG GAAGGTATAT GGCTGTTTAC CAAAAGCTCG CCAAGAAACA CCCGTCCTTC AGAGAGAGGT CAGAGAACAC TGATCTAATA GTGGAAATCT CTTTGCAGCC TTGGCAAGCA TTCAGACCAG ACGGTGTCAT CATTTTCTCT GACATCCTCA CGCCTTTACC CGCGTTTGGT GTCCCTTTTG ACATTGAAGA GGTGAAAGGC CCTGTGATCC AATCTCCCAT CCGAACTGAA GAAGATTTAA AAAGATTGCA TGCCATTGAT TTCGAGAAAC TACAGTTTGT TGGAGATTCT CTCAAGATTT TGAGACGAGA GGTTGGGGAA CATGCTGCGG TATTGGGTTT CGTTGGAGCG CCTTGGACAA TTGCAACATA TATTGTTGAA GGGGGAACAA CTCGGACATA TACAGTCATA AAGAATATGT GCCACACTGC ACCAAATGTA TTGAGAGCTC TATTATCTCA TTTAACCAAG GCCATTACCG AGTATGTTGT TTACCAAGTT GAGCATGGAG CTCACTGCAT ACAAATATTC GATTCATGGG GTGGCCAACT GACTCCTGAG ATGTGGGAGC GCTGGTCCAA GCCCTACATC GAAGAGATCA TTCATGCTGT AAAGAAAAGA TGTCCAGATA CGCCGATAGT TTTCTACATC AATGGAAATG GTGGCCTTCT TGAGCGAATG AAAGGAACTG GAGCTGATGT TATTGGACTT GACTGGACTG TAGATATGGC TGATGGAAGG AGGCGATTGG GAAGCGAGGT TAGTGTGCAG GGAAATGTTG ATCCAGCCTA CCTATTCTCT CCGCTTCCTG CTTTAACCGA AGAAATTGAG AGAGTTGTGA AGTGTGCTGG ACCAAAAGGG CATATTCTCA ATCTAGGACA CGGTGTCTTG GTAGGGACAC CAGAGGAAGC CGTGGCTCAT TTCTTTGAAA CCGCTAGAAA CATGGATTAC CAAACACTTT TCCAAAATCA TGTTCCTGCA GAAAAAGCTG AATCTGAATT GGTTGCCTGA GAAATGGAAT CAGAGAAAAG TTCCATGTCT GACCCATAAT CGATGCGAGA TTTGGTTACT TGCTATGAGA TACATTCGAA GCTGTCCAGT TTTTGTTTGG CTTGCCTGTG GATTTCCAAT CTTCTGGACC AAGCTGTACT TAACTCTTAA CAATGTATTG AGTTGCTCAT AGGCTTCAAA TGCTGCTGCT TCTTTTGGAG ATATGACTCT GGTTAAAATT TTAAATAAAC ATTAATCTGG TTAATCTCAA ACCTTTGCTC TGTTTCTTAT CCCATTATTT TTCATATGGT TCGTTCT 
Length1587
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5902465.. 5904810
Download Sequence
A.thaliana
AGI-codeAT3G14930.1
DescriptionUroporphyrinogen decarboxylase
TAIR curator summary
Alias[HEME1]
Gene coexpression
MR
MR Locus Description
17.2047 Ahg492755 photosystem II subunit QA
21.3073 Ahg483311 Rhodanese/Cell cycle control phosphatase superfamily protein
26.8328 Ahg490167 photosystem II subunit Q-2
32.3265 Ahg923621 Photosystem II 5 kD protein
34.0588 Ahg489709 ascorbate peroxidase 4
37.3095 Ahg488387 Cyclic nucleotide-regulated ion channel family protein
37.4166 Ahg470335 protochlorophyllide oxidoreductase C
39.1152 Ahg484284 P-loop containing nucleoside triphosphate hydrolases superfamily protein
40.4722 Ahg472386
43.7836 Ahg470899 photosystem I subunit O
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression