Detail


ID : Ahg488399

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488399|fgenesh2_kg.6__1533__AT5G15550.1
Sequence
CATCGCCTCG AGCCAGAACC CTAATTTATC TCCGCGTCTT CTTCTTGCTC CGTAACAGGC CATCGGAGAA GTTAAGAGGC AAAAATGGAT GTCGACAGAG AAGATGTTTC TAGAAGACTT CACGTCAAGT TCGTGACGAA GCTTGACTCT CCGTTCAAAG TTCCGGTCAA TTCCGTCGCC ATCCCTTCCA ATGTCACTCG TCTCGGTCTT TCTTCCATCG TCAATTCTAT TATCGAATCC GATAATCCTG AGTGGAAAAC TGAGCCATTT GATTTCCTGA TTGATGGGGA GCTTATTCGG ATGTCACTCG AAGAGTTTCT TCTAGCAAAG GGAATATCGG CGGAGCGTAC TCTTGAAATC GAATACATAA GAGCTGTGAC ACCACGGAAG GAAGAAGAAC CCTCCTTGCA TGATGATTGG GTCAGTGCGG TGAATGGTTC TTCTCCCAGG TTCATTTTGA CTGGATGCTA TGACAGTTTA GGAAGGGTAT GGAGTTCGGC TGGATCGTGT TCACACATAT TAGAAGGCCA CTCTGGGGCT ATCTCTTCTG TTGCTTTAGT TAATTCCAAT GATGCAGAAA CTGTTACTGT AGCTACTGCC TCTAAAGATC GTACTTTGAG ATTGTTTAAG TTTGATCCAG CTGAATCTGT TGACTCTACT ACAAAAGTTA GGGCGTATAA GATATTACGT GGACACAAGG CGTCAGTGCA AAGTGTTTCA GCTCAGAAAT CCGGGAACAT GGTTTGCTCG AGCTCATGGG ATTGCACGAT CAATTTGTGG AACACAAATG AGTCTAATTC AGAAGGGGAG TCAGTATCAG TGAAGAAAAG AAAAGGGAAT AATCAGGCCG AGGAATCTCA GTCAGAGGGA GAGGCGGTGA CTTCTTTGGT TGGACACACA CAGTGTATCT CATCAGTTGT TTGGCCAGAG TATGATGTAA TTTATTCATC TTCATGGGAC CATTCCGTAA GGAGATGGGA TGTTGAGACA GGGAAAGATT CTTTGAACTT GTTCTGTGGA AAAGCTCTCA ACACGGTGGA TGTTGGTGGT GAAGGTTCTG CCCTTATAGC TGCTGGTGGA TCAGATCCAA TCCTTAGAGT ATGGGATCCT CGTAAGCCAG GAACATCGGC TCCCGTGTTT CAATTCTCTT CACACTCATC ATGGATTTCC GCCTGTAAAT GGCACAAAAG CTCTTGGTTT CACTTGCTCT CCGCTTCCTA TGATGGCAAA ATCATGCTCT GGGATCTCAG AACCGCTTGG CCTTTGTCAG TAATCGATAC ACACAATGAC AAGGTTTTAT CTGCTGACTG GTGGAAAGGA GAGAGTGTAA TCAGTGGAGG AGCAGACTCT AACTTGCGAA TTTCTTCCGG AATTGCAATT TCTTAAAAGA AACACCAATG ATTCACGATC TTGGAATGAG ACTGTTGTAA GTTCTGCTGA AGAAAGCTTA TTGTCTTCAA GGTTGTATAC TCTTCATATT CCGAAATGTT AAATCTTAAT TATATTTTTG GTGGGAAGCA ATTTT
Length1525
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6076573.. 6079889
Download Sequence
A.thaliana
AGI-codeAT5G15550.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg470252
8.3666 Ahg477959 ARM repeat superfamily protein
13.4164 Ahg486159 homologue of NAP57
16.9115 Ahg894080 RNA cyclase family protein
16.9706 Ahg477224 PENTATRICOPEPTIDE REPEAT 596
17.3205 Ahg477786 ARM repeat superfamily protein
18.1659 Ahg903674 3'-5'-exoribonuclease family protein
19.8997 Ahg935730 Ribosomal RNA adenine dimethylase family protein
23.8747 Ahg481069 SKP1-like 4
25.6905 Ahg476360 pumilio 23
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression