| Annotation |
|---|
| Description | jgi|Araly1|477786|fgenesh2_kg.3__487__AT3G05040.1 |
| Sequence |
GTAAACCCCA AAACCCAAAG CCAAGCCAGA GAGATTCTGC AAGACGAGGA AGAAAGTGTG GGAATCTCTA CTTTTGGTAA AGTTTCATCG CAAGTAATGG AAGATAGCAG CTCCACGGCG AGTAATGTGG CCCGAGCTAT TCTCGCCGTC GTCGATTATA GCTCCACGTC CGACACTCGC AAATCGGCGG TCGAATTCCT GGATTCTATC AAATCTGGAG ATGTCAGAGT TTTGGCAAAT ACTTCTTTTC ATCTTGTGAA AAAAGAGTGG TCTTCAGAAA TTCGTCTCCA TGCTTTTAAG ATGCTACAGC ATTTGGTTAG ACTACGATGG GACGAATTAA GTCCTCCGGA GTGCAGGGAT CTTGTTAATG TTTCTGTTGA ACTAATGTCA GAGATTGCTA ATGCATGCGA GAATTGGCCT CTTAAGAGTC AGTCTGCTGC CCTTGTAGCT GAGATAGTTA GAAGAGAAGG CCCTGATGTT TGGCAAAAGA TATTTACTTT ATTAACTTCA TTGTCTACTC AGGGTCCCTT ACAAGCTGAA TTGGTCTTGA TGACGCTTAG ATGGCTTCCT GAAGATATTA CAATTTACAA TGATGACTTG GAAGGTGACA GGCGTAGGCT ATTGTTGCGG GGACTTACTC AATCTCTGCC TGAGATTTTA CCTTTATTGT ATAATCTTCT TGAGAGACAC TTTGGAGCTG CAATGAGTGA AGCTGGTAGG CAGCAGTATG ACTTGGCAAA ACAGCATGCA GATGTGGTTA TAGCTTGCTT GAATGCCATC ATTGCATACA CTGAGTGGGC TCCTGTTCCA GATCTTGCCA GATATGGAAT TCTTAGTGGT TGCAGCTTCT TACTTTCTTC TCCTGACTTC CGTCTTCATG CTTGTGAGGT TTTCAAACTC GTCTGCTCAA GAAAAAGACC CAGTGATGCT TCTAATGCAG AGTTCGATTC TGCAATTAGC AATTTGTTTC AGATCCTGAC GAATGCCTCG AGAGAATTAT TATGTAGATC CTCCTCAAGT TCTAGCGTTA TAGATGAAAA TGATTATGAT TTTGCTGTAT GCTTGTGTGA GAGTATGGCC TCTTTAGGCT CAACTAACTT GCAATGCATC TCTTCTGATG GTGGTGTTAT GGCTGTTTAT CTTCAGCAGA TGCTTGGCTT TTTCCAACAC TTCAAGTTGG GCCTTCACTT CGAGGCACTT CTCTTTTGGC TGTCATTGAT GCGGGATTTA CTTCCAAAGC CTAAGGCTGC GGCTTATCCA AGTGGTGGGG GATCATCAAC TGGCGGTGTG GATAGTTCAA GCCAGGTTGA TAGTGAAAAG AAAAAGACTT TAAGTCTTAT TAATGATGAC ATCTCTAGCG TTATACTGGA TGTATCTTTC CAGCGGATGC TCAAGAAAGA AAAAGTTCCT ATTGGAATTG CTCTTTCGCT TGGGCCCCTA GAACTCTGGA GTGATGAATT TGAAGGGAAG GGGGACTTTG GCCCGTACCG ATCAAAGCTT CTAGAGTTGA TCAAGCTTAC TGCTTCTCAC AAGCCTCTCA TCTCCAGTAC CAAAATATCT GAAAGGGTGA TTACACTCAT TAAGCACCTA TTGGCTTCTC CAGCACCTCT TCAGGATGTA GCAGTGATGG ACAGCCAGCA GTTAGCACTT GACTGTATTG TGGCAACGCT TTTTGATGGA TCAAATGAGT TTGCTGGTGG AAGTTCTGAA GTTCATTATG CATTACGTGG AATATTTGAG GGATTGCTTC AGCAGCTTCT CTCTTTGAAA TGGAATGAAC CAGAACTTAT GAAAGTGCAT GTGCACTATC TGGATGCAAT GGGTCCCTTT TTCAAGTATT TTCCAGATGC AGTTGGAAGT GTCATCAATA AATTATTTGA GCTTCTCACC TCTCTTCCAC ACGTTGTGAA GGATCCAGCT ACTAGTACAT CTAGAGCTGC AAGATTGCAG ATTTGCACAT CTTTCATAAG AATAGCCAAA GCTGCAGAGA AAAGTGTTTT GCCTCACATG AAGGGTATTG CTGATACAAT GGGGTATTTG ACAAAAAAAG GAACTTTACT CCGTGGGGAG CATAACATTC TGGGTGAAGC ATTTCTTGTT ATGGCTTCCT CAGCAGGAGC TCAACAGCAG CAAGAAGTTC TAGCTTGGTT ATTGGAACCA TTGAGTCAAC AGTGGATCCA GCCAGAGTGG CAGAACAATT ATCTATCAGA CCCGATGGGT CTTGTTCGTT TATGCTCCAA CACATCCTTC ATGTGGTCCA TATTCCACAC TGTTACATTC TTTGAGAAAG CACTCAAGCG AAGTGGATAC AGAAAAAGCA ATTTGAACAC GACCTCTGCG ACAACTCCAG CTTCACATCC TATGGCTCAT CATCTTTCTT GGATGTTGCC ACCCCTCTTA AAACTACTCC GTGTTCTTCA TTCCCTTTGG TCTCCCTCTG TATTTCAAAC ATTACCCCCA GAACTGAGGG CAGCAATGAC AATGACTGAT GCTGAGCGAT GCAGTCTCCT TGGTGAAGCA AATCCTAAAT TGTCAAAAGG TACATCGGTT TATGCTGATG GGTCATTCGA TGGAAATAAG GAAGGACAGG TCGAGGCAAG TGAATCTGAT ATACGAAATT GGTTGAAAGG TATCCGAGAT TGTGGATACA ACGTGTTGGG CCTATCAACA ACCATCGGAG AGACATTCTT TAAATGCTTA GATCCTAACT ATGTTGCGAT GGCACTCATG GAAAATTTGC AGTCGATGGA ATTCAGGCAC ATTCGGCTGT TCATTCATAC CTTTATAACT TATATAGTCA AATTTTGTCC GGCGGATATG TGGGAGTCAT GGCTCGGAGT GCTTCTGCAC CCATTGTTTA TTCACTGTCA GCAAGCTCTC AGCTCCGCCT GGCCTGGTCT TCTACAAGAG GGCAGAGCAA AGGTTCCGGA CTTGTTTGGC ATACAAAGTG GATCAGACAT GAAACTTGAA GTGATGGAGG AAAAACTGTT AAGAGATTTA ACTCGGGAGA TTGCGACTCT CTTTTCAACA ATGGCTTCTC CTGGACTAAA CACAGGAGTT CCAGTTTTGG AACATTCAGG ACATGTTGGT CGTGTGGACA TGTCTACTCT CACGGATTTG CATGCGTTCA GATCCAACTC TATGGTGGGT TTCCTCCTGA ATCACAAAAG CGTAGCTCTA CCAGCACTGC AGATATGTTT AGAAGTCTTT AGCTGGACAG ATGGAGAAGC GACCACCAAA GTCTGTTACT TTTGTGGTGT TGTTGTTCTT CTAGCTAAAC TAACAAATAA CGTGGAGCTC CGAGAATTTG TTTCAAAAGA TATGTTCTCT GCAGTCATCC GCGGCTTAGG CATGGAGTCC AATGCCATTA ACAGCCCTGA TTTAGTTAAT ATATGCCGTG AAATATTTAT CTATCTCTCT GACAGAGACC CAGCTCCTCG CCAGGTTTTG CTTTCGCTCC CGTGTCTCAC TCCCAACGAC TTGCATGCTT TTGAAGAAGC TGCAGCCAAA ACTACCAGCC CCAAAGAACA AAAGCAGCTT ATGAGGAGCT TGTTGTTGTT AGGTACTGGG AACAACTTAA AAGCACTTGC TGCTCAAAAA AATCTGAATG TTATCACCAA TGTCACAGCA AGATCGCGGC TACCCGCAAG CGCTTCAGAA ACAATTGGAG CGGGTGTTTT GTGGGAGGAA GAGCTCTTAC AATGATTAAA GAGTTGTACA GAGTATAAAT AGAGTTTATT TGAGATGCCA TGTAATAGTA GAGAAGCAGG TTTCTGTTTA TGTCCTTACC TTAATACCTT TACTTGTTAA ATTCATAGGT AGAAAGAAGG AACCTCTTAC CAAAGCTTCC ATGTGATAAG CAAAGTTTTT GTAATTTTCG ATTTTGTTCT TTATCAGTAT TTAAACAATC GGTGAATT |
| Length | 3918 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 1751191.. 1759363 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G05040.1 |
| Description | ARM repeat superfamily protein |
| TAIR curator summary | Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species. |
| Alias | [HST][HST1][HASTY][HASTY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.65685 |
Ahg478644 | SNF2 domain-containing protein / helicase domain-containing protein |
| 9.27362 |
Ahg496494 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 10.8167 |
Ahg495454 | Nucleotidyltransferase family protein |
| 11.4891 |
Ahg489049 | replication factor C1 |
| 12.1244 |
Ahg911763 | nucleoporin 155 |
| 14.6969 |
Ahg473107 | Apoptosis inhibitory protein 5 (API5) |
| 15.1987 |
Ahg492065 | Met-10+ like family protein |
| 15.9687 |
Ahg922127 | pentatricopeptide (PPR) repeat-containing protein |
| 16.2481 |
Ahg938671 | Calcium-dependent phosphotriesterase superfamily protein |
| 17.3205 |
Ahg488399 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|