Detail



ID : Ahg488470

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488470|fgenesh2_kg.6__1604__AT5G16190.1
Sequence
ATGCAAGAGG ACATGGAGCT CGGAAATCAA AACTTTCCCA TGGTTCTTGT CCAAATCCCA ATGTACAATG AACGAGAGGT GTTTCAGTTA TCCATTGGTG CTGCTTGCAG ACTCATATGG CCATTGGAGC GACTAATCGT TCAAGTTTTA GATGATTCCA CTGATCCCAC CATCATGGAA ATGGTGAACA TAGAGTGTGG AAAATGGGCA ACCAAAGGCA TTAACATAAA ATGTGAGAGG AGAGATAATA GAAATGGCTA TAAGGCTGGA GCTCTTAAAC AAGGTATGAG GCATAGTTAC GTCAAAACAT GCACCTACAT TGCAATCTTC GATGCCGACT TCCAGCCAGA GCCTGACTAC CTACAACGGA CTGTTCCATT TCTTATCCAC AATTCCGAGC TCGCTCTTGT TCAAGCTCGA TGGAAATTTG TGAATGCGAA GAAGTGCTTG ATGACTAGGA TGCAGGAGAT GTCCCTCAAT TACCATTTCA CGGCAGAGCA AGAATCCGGA TCCACTAGAC ATGCCTTCTT TGGCTTCAAT GGGACTGCTG GTGTATGGAG ACTGGCGGCA ATGGAAGAAG CCGGTGGTTG GAAAGACCGA ACCACCGTAG AAGACATGGA CTTGGCCGTT CGTGTTGGTC TACATGGCTG GAAATTTGTC TTCGTCAATG ATGTTGCGGT GAAAAGTGAG CTACCAAGCC AATTTAAGGC TTTCAGGTTC CAGCAACATC GATGGTCATG CGGTCCAGCT AATCTCTTCA GAAAAATGAC TATGGAAATT ATTCGCAATA AGAGAGTGAC GATTTGGAAG AAATTTTATG TGATCTACAG TTTCTTTTTC GTAAGGAAGA TCATAGTCCA TTTCTTCACT TTCTTCTTCT ATTGTTTCAT TCTTCCTATG AGCGTATTCT TTCCCGAAGT CAACATTCCG ACTTGGTCAA CTGTTTACTT TCCTTTTATG ATCACTCTAT TCAATGCCAT TGCGACACCG CGATCTTTTT ACCTCGTGAT TTTTTGGGTC TTATTCGAAA ATGTAATGGC TATGCATCGG ACCAAAGGCA CTTTCATCGG TTTACTTGAA GGAGGGAGAG TGAACGAATG GGTCGTCACC GAGAAATTAG GAGATGCTCT CGAGACTAAG TTACTTCCCC AAGTCAGAAA ACCTCGCTAT GGGTTTCTCG ACAGGATAAA CTCAAAGGAG ATGATGGTCG GGATATACAT ATTGTGTTGT GCCTCCTATA ACCTTGTCTT TGGGAAGACA TTGTTATATA TTTATCTTTA CATGCAGGCT CTTGCTTTTA TTATTGCCGG AATTGGTTTT GTAGGAACTT GA 
Length1332
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6307274.. 6310167
Download Sequence
A.thaliana
AGI-codeAT5G16190.1
Descriptioncellulose synthase like A11
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLA11][CSLA11][ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11][cellulose synthase like A11]
Gene coexpression
MR
MR Locus Description
14.6287 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
29.7993 Ahg890648 proline-rich family protein
34.1614 Ahg928939 Leucine-rich repeat (LRR) family protein
38.0789 Ahg351411 HXXXD-type acyl-transferase family protein
40.9878 Ahg313119 RNA-binding (RRM/RBD/RNP motifs) family protein
51.788 Ahg496502 Pectin lyase-like superfamily protein
51.9615 Ahg945946 SKU5 similar 4
57.7062 Ahg478905 Plant protein of unknown function (DUF641)
58.7878 Ahg921402 cellulose synthase-like A3
62.1369 Ahg495136 Heavy metal transport/detoxification superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression