Detail



ID : Ahg488878

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488878|fgenesh2_kg.6__2012__AT5G19840.1
Sequence
ATGCCGATGG GATGCGAGTT TCCGAAGATT CAAACCTTCG AGAATGCTCT TTCTGCCGCC GACTTCGAGT CTACCGTCGA ACTCACCAAC TTCCCTGCAG TTTTTCGAGG ATGTGCTAGT GACTGGGATG CGTATTCTAA GTGGAATCCA TTCAACAGTG GACTTGATTA TCTAGAGGAA CGTGCAGGTT CAGTTGAAGT GGAGGCAATG CTTACAAAGA CGGCTCCAAT TTTCAACGGT GATATCAGAA GCCATGATAG GGTATCATTG CCGTTTTCGG ATTTTATCAG ATTCTGCAAG CAGCATATGA GTGACAAAGG GAATGGTTCT GGTGTTGATG CTAAGTCTGC AGATTTAACT CTTATGCCTG AGGACTATAG ACCTGGACAA ATATACCTAG CACAGTTTCC AATTCTGAAT GACGAGAAAG AAGAGAAGGT TCAACTTAAG ATTCTGAGGC AAGACATCCA GACGCCCACA CTTTTAGGGG AAAAGTCATT GTCTTCTATC AACTTTTGGA TGAATTCTGC ACACGCTCGA TCAAGTACCC ACTATGATCC ACATCATAAC CTTTTATGCG TAGTTTCAGG GCGTAAAAAA GTTGTCTTGT GGCCCCCTTC TGCAAGTCCC TCGCTCTACC CGATGCCTAT ATACGGAGAA GCGTCAAACC ATAGTTCGGT TGGTCTAGAA AATCCAAATT TATCAGATTA TCCAAGAGCA GAGCATTCCC TGAAGCAGTC ACAGGAGGTT ACTCTTAACG CTGGTGATGC AGTATTCATT CCTGAAGGTT GGTTCCATCA GGTGGATAGT GAAGAGCTGA CTGTTGCTGT CAACTTTTGG TGGCAATCAA ACATTATGTC TAACATGCAT GAACACATGG ATTCATATTA TCTGCGACGA ATCACAAGAA GATTGATAGA CAGAGAAATG AGCCTGTTAG TCTCGAAACC TTCTTCAACT GATTTAGGGC ACCAGTCTGA GCATATTGAC CAATCACACA TTGAGATGGC AGAAGGTGGG AATGATAATT TTGGCAATGA AAGCATTAAA ACGGGCCTCA GCACATTGCA TGAAAAAGCT TCGCTGCATG ATCTTGATCC TTCTGCTTCC CAGGCGCTTC ATGAGCTTAT TTCTTTAGTC CATGACCACG TTAATGCTGT TGATACAAAA GATGATCGCG TTGCCCATTT GCTTTGGAAT CTTGAAGCAT CTAGACTTCG GGATGTTCTC CTTGCAATGG CACGTTATTT CCCAAGAACC TTAGAAGCAT TAATACTCCA CATGCTCTCA CCCATTGCTG CGGAAGTTCT AACACAGAAG TTTGATGAGA TTGACCAACA GACTGGTGAA GAAGATAGAA ACCAGTTCTT TCGGGAATTT TATGGTGCAT TCGATGATGA AGCAGCTGCG ATGGATATAA TTTTAAGTAG GAAAGAGTCT TTTGCATTTC AGGCATTTAA GAGTGTACTA AACAAGTATT TGGGGGTCAA GATTGCTTCA CCAACAATAA ACATTTGAAG GGTCTTGGGT GTGGTCGTTT GTGGTGGCCA GGTGAATGTG ATCGGACAAG AGAGAGGTAG TGCCGTGTTA GTTAGGAAAC TGATAAAAAT GTTGCTGTTG ATATTGGAAG GTGCTCCGTT CACTCTCATT AGCATTTCTT CTGCCATCGA ATAGGATTAC TATTTATTTC ATGGCCAATG GGGGCGGGAG CTTTTGAATC GTATAGTCGA CAAAACCAGA ATTTTGAATA GGAAAAAAGG AAGTGATGTA TGGTTTGCTA ATTTGTTAGA TATAGGTCTT GCAAGAAAAT GTGTCTATGT TTAATGGAAA CCAATCATGA ATTCTTGTGT TGAAACTTGA AAGTCTTGTA TTTCCAATGG GTTTTGAAGA AAAAGGTTTG TTTCTC 
Length1906
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7999742.. 8004211
Download Sequence
A.thaliana
AGI-codeAT5G19840.2
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.74597 Ahg486408 protein kinase family protein
18.5472 Ahg475079 Terpenoid synthases superfamily protein
19.2354 Ahg491970 AFG1-like ATPase family protein
25.7488 Ahg482581 MMS ZWEI homologue 3
27.1109 Ahg484287 Translin family protein
33.0454 Ahg495199 Diacylglycerol kinase family protein
33.2716 Ahg474203
33.7046 Ahg327388 Bromo-adjacent homology (BAH) domain-containing protein
49.6387 Ahg911261 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
50.1996 Ahg926973 VPS35 homolog B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression