Detail



ID : Ahg490575

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490575|fgenesh2_kg.7__8__AT4G38160.2
Sequence
CTTGCAGTGG TATGGAGGTC ACAAATACCA GCAGCATCAT GTGGTTCTTC AGGGACAAAG GTTTCGATGA TCCGAGTATC GACAAGATGT TGAGAAAATG CAAGCAGTTG GACAAGGCCC AAAGCGATGT GGCATCTGAA AACTGGGACT ACCTGAGGAA CATTGTCGGT ATCCAAGAGA GAAAACTCCC TTACATCGTC TATCGATGCC CCAAAATCCT GACTTTACGC CTCGATGAGA GACTCATCCC CATGGTCGAG TGCCTCTCCA GTCTAGGAAG GAATCCTCGG GAAGTGTCTT CCGCCATTAC CAAGTTTCCT CCAATACTCT CTCATAGCGT GGAGGAGAAA CTCTGCCCCC TTCTTGCTTT CTTTCAAGCG TTGGGTGTGC CTGAGACTCA ACTTGGCAAA ATGATACTTT TTAACCCAAG GCTTATCAGC TACAGCATCG ACACCAAGCT GACAGTGATC GTCAGCTTTC TTGCTACTCT TGGCCTTGAC CAAGATGGGA TGATCGGCAA AGTTCTGGTC AAGAACCCAT TTCTTATGGG GTATAGTGTT GATAAAAGGT TAAGGCCTAC CACTGAGTTC TTGAAATCAT CCGTTGGTCT GAGTGAGGAT GGCATTCAGT CGGTGGTCAT GAATTTCCCA CAACTTTTGT GCAGAGACGT TAACAAGATT CTGAAACCAA ATTATGATTA TTTGAGGGAG TGTGGCTTTG GAGATTCCCA GATAGCAACC ATGGTGACTG GTTATCCCCC AATTTTGATT AAGAGTATTA AGAATTCACT ACAACCTAGG ATCAGATTCC TAGTCCAGGT GATGGGAAGA GGCTTGGATG AAGTGGCTTC TTATCCTGAA TTCTTTCACC ATGGATTGAA GAAGAAGGTA GAATCAAGGT TTAAACTTGT TAAAAAGAAC AACATTGACT GCAGCCTTAG AGAAATGCTG GACTGTAACA CAAAGAAATT CCATGAGAAG TTTGGCTTTT CAGATTCATT GTCATTCTTG GCTTGTGATT ATTGCAGCAA CCGACAAGCA ACAGAAGATT CTGCCTAGCC TTACTGCAGA ACAGAATATG CAGCAATGCA GTCTAGCAGC TTGTTAAGTA TAGGAGGGTA AAAAGCACCT AGTCATTCCA CAAATATGTC AAAAAGTCAC ATTTGATGAC AAGAGATGGT TGATCGTTCT CTGCCTCTAA GTAGTATGTA CCTGTCATAT AAAAATGAAA CCCCCTCTGC TCTCTTTGGA TGAGATCAAC CGTATTTTAA ACCGGCCAAA CTTGAAATTT TGTTTGCTTC AAATGCTCTT TCAAGTAGAG TCCCTTTGTT ATTCACGTTT GTAACTATTC TATTCTTTCT CTCCTTGGAC GGGTGTGTGT AAGGTTTTTG TTATTCGGTT TTTCCGATGA AAGTTGAATC AAGAAGAAGT 
Length1430
Protein Sequence
Protein Residue
Map Locationscaffold_7: 16246.. 18217
Download Sequence
A.thaliana
AGI-codeAT4G38160.3
DescriptionMitochondrial transcription termination factor family protein
TAIR curator summary
Alias[pde191][pigment defective 191]
Gene coexpression
MR
MR Locus Description
8.42615 Ahg470656 GSK3/SHAGGY-like protein kinase 1
8.83176 Ahg488058 Rho GTPase activation protein (RhoGAP) with PH domain
12.9615 Ahg925897 glycine-rich protein
14.8997 Ahg951859 Alpha amylase family protein
15.3623 Ahg477507 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
17.4929 Ahg482988 Radical SAM superfamily protein
18.4932 Ahg488901 isopentenyltransferase 9
23.1517 Ahg914665 NDH-dependent cyclic electron flow 5
23.3238 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
23.4521 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression