Detail



ID : Ahg489245

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489245|fgenesh2_kg.6__2379__AT5G23860.1
Sequence
TCTCTTTCTC TCTCAATTTT TTTAGTTTCC TACTAAAGCT TAGTAATCGA AAATGCGTGA GATTCTTCAC ATTCAAGGTG GTCAATGTGG AAACCAGATC GGAGCTAAGT TCTGGGAAGT AGTATGCGCC GAGCACGGGA TCGATTCGAC GGGAAGATAC CAAGGAGAGA ACGATTTGCA ACTCGAACGA GTCAATGTCT ACTACAACGA AGCGAGTTGC GGAAGATTCG TCCCACGCGC CGTCCTCATG GATCTGGAGC CTGGGACTAT GGATAGTGTC AGATCCGGTC CGTACGGTCA GATCTTCCGT CCTGATAACT TCGTCTTTGG TCAATCCGGC GCCGGTAACA ATTGGGCTAA AGGACATTAC ACTGAAGGTG CTGAACTTAT CGATTCCGTT CTCGATGTTG TTCGTAAGGA AGCTGAGAAT TGTGACTGCT TGCAAGGATT CCAAGTGTGT CACTCATTGG GAGGAGGAAC TGGATCTGGA ATGGGAACTT TGTTGATATC AAAGATTAGG GAAGAGTATC CAGATAGGAT GATGCTGACT TTTTCGGTGT TTCCATCTCC GAAAGTGTCA GACACTGTTG TTGAGCCTTA CAATGCAACT CTCTCTGTTC ATCAGCTTGT TGAGAATGCA GATGAGTGTA TGGTTCTTGA CAATGAAGCT CTTTATGACA TTTGCTTCAG AACTCTTAAG CTCACCACTC CTAGCTTTGG AGACTTGAAT CATCTCATCT CTGCAACCAT GAGTGGTGTC ACTTGCTGTC TCCGTTTCCC GGGTCAGCTT AACTCTGACC TGCGTAAGCT TGCAGTGAAC TTGATCCCAT TCCCTCGTCT CCACTTCTTC ATGGTTGGGT TTGCACCGCT TACATCTCGT GGATCACAGC AATACAGAGC GTTAACTGTT CCTGAGCTCA CCCAACAGAT GTGGGATGCC AAGAACATGA TGTGTGCAGC TGATCCGCGT CACGGCAGGT ACTTGACAGC CTCAGCCATG TTCAGAGGCA AAATGAGCAC CAAAGAAGTT GACGAACAGA TGATCAACGT TCAGAACAAG AACTCATCTT ACTTTGTGGA ATGGATCCCA AACAATGTGA AATCAACCGT GTGTGACATT CCACCAACGG GTCTGAAAAT GGCTTCGACT TTCATCGGGA ACTCGACTTC GATCCAGGAG ATGTTTAGGC GTGTGAGCGA ACAGTTCACA GCGATGTTCA GAAGAAAAGC TTTCTTGCAT TGGTACACAG GTGAAGGAAT GGACGAGATG GAGTTCACAG AGGCAGAGAG CAACATGAAC GATTTGGTAT CAGAGTATCA ACAGTACCAA GACGCAACCG CTGATGAGGA AGAAGGGTAT GAGTATGAAG AAGACGAAGT GGAAGTGCAG GAGGAGCAAT AACAACAGCT TCTCTCTTTT TCTTAAGATC TTTTTTTTTT TTGCTCGTTT GTGTGAGTTA GTGTCTTCTT ATTTCTTTTT CTTTTCTGGT TATGGTTTTC GTGTATTGAC ATTTGGCTAT GTGTGATGGT GCTTTTAGGT TTAAGGCTTA GGAAAATATA TGTTTATATG TCTTTTCATG TGATTGGATT TGAGATATTG TTTGTTAGGT TTTT 
Length1614
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9701948.. 9703682
Download Sequence
A.thaliana
AGI-codeAT5G23860.1
Descriptiontubulin beta 8
TAIR curator summarybeta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.
Alias[TUB8][tubulin beta 8]
Gene coexpression
MR
MR Locus Description
17.0587 Ahg896320 QUASIMODO2 LIKE 2
20.5426 Ahg480375 arabinogalactan protein 9
26.3439 Ahg945946 SKU5 similar 4
31.1288 Ahg495659 FASCICLIN-like arabinogalactan 1
31.6228 Ahg478170 Leucine-rich repeat protein kinase family protein
34.641 Ahg470654 Fatty acid desaturase family protein
41.8569 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
42.3674 Ahg477690 Li-tolerant lipase 1
42.6615 Ahg938592 Leucine-rich repeat protein kinase family protein
49.6588 Ahg936082 expansin A15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression