Detail



ID : Ahg489293

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489293|fgenesh2_kg.6__2427__AT5G24314.1
Sequence
GTGTAGCCAT GGCTTCCTTC ACCTGTTCTT CTCCATCTTC GATTTTACCT ATTGCTGATA CAAGAAGCGG GAATTTGCGC TGCACATTTC ACTCTCAGGT TTCTTGTGGG ATTCAGAGAG ATGATAATGG ACGCCGTGTT TGGCGGAGGA GGACATTGAC GAAGAAGGAC GATATGTTGC GTTACAAAAT GCAAAGAGTT CCATTTGTGG AGGAACAAGT AAGGAAGATA AGAGAAGTTG GGAAAGTAAT GACAATGGAC ATAGAGCAGC TGCTTTTGAG GGAAGACAAT CGGTTTGAAT TTGTCAATAG TGTAGCAGCT GAAGCAACAG AGTACGTGGA AAAAAACAGA GACGAATATG GAGGTTCCAA AAAAGCCATC TTTCATGTTC TGAGCAACCG CGTGAACGAT CTCGGGTTTG ATCGCCCTGA GGCTTATATA GAAGCTGATC CTTACAAGCC CGGTCCTGGC TATTTGTTGG AGTATTACAC ATGAGATATT ATTACAATTG TATTACCAAA CCAAATCAAT GCATTCACAG CTTTG 
Length545
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9987006.. 9988628
Download Sequence
A.thaliana
AGI-codeAT5G24314.2
Descriptionplastid transcriptionally active7
TAIR curator summary
Alias[PDE225][PTAC7][TAC7][PIGMENT DEFECTIVE 225][plastid transcriptionally active7]
Gene coexpression
MR
MR Locus Description
8.7178 Ahg473852 Protein of unknown function (DUF3223)
11.225 Ahg329753 Peptidase S41 family protein
13.1909 Ahg494259 Ribosomal protein L19 family protein
14 Ahg353127 accelerated cell death 2 (ACD2)
14.8324 Ahg317881 alpha/beta-Hydrolases superfamily protein
18.3848 Ahg926901 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
18.7083 Ahg487226 Protein of unknown function (DUF1997)
19.3649 Ahg483292 nudix hydrolase homolog 23
20.3961 Ahg472316 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
21.2132 Ahg493880 ribosomal protein large subunit 27
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression