Detail



ID : Ahg489386

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489386|fgenesh2_kg.6__2520__AT5G25350.1
Sequence
ATTTCTTCTG TAAAAATCTT CTCTTTTTGC CCTAATCTTC TAGGGTTCTT CTCTTTTTCA TGAATCTTAG TCTTCAATCT CTATTATTCT TCGTCTTTGT TCTTCAAATC GTCTTCGAAT TATGTCTGGA ATCTTCAGAT TTAGTGGTGA TGAAGATTGT TTTCTTGGGG GATCATCGAT GTATCTATCA CCAGGGAGCT GTCCCGGCGT GTATTTCCCA GCGCGTAAGA GGTTACGTAT CGCTGCGCCG ACGGTTTTCA GCGGTTTCGA GGAGAAGCAA ACATCGATCG ATGTATTGCC AGATGAGTGC TTGTTTGAGA TTCTCAGACG TTTACCTTCT GGAGAAGAGA GGAGTGCTTG CGCTTGTGTT TCCAAGCATT GGCTTAATCT TTTGAGTAGT ATCAGTAGGA GTGAAGTGAA TGAGTCAGTT CAAGATGTTG AGGGTGAAGG GTTTTTGTCA AGAAGTTTAG AGGGTAAGAA GGCGACGGAT TTGAGGTTGG CAGCGATTGC AGTTGGGACA TCGAGTCGAG GAGGGTTGGG GAAGCTTCAG ATTCGTGGGA GTGGTTTTGA TAGCAAAGTG ACTGATGTTG GTCTTGGGGC TGTTGCTCAT GGTTGTCCAT CTCTTAGGGT TCTTTCTCTA TGGAACTTAC CTGCTGTTAG TGATATGGGT TTGTCTGAGA TCGCACGGTC ATGCCCGATG ATTGAAAAAG TTGACCTTTC TCGATGTCCA GGAATAACTG ACAATGGTTT GGTTGCAATT GCTGAGAGCT GTGTGAATCT GAGTGATCTG ACGATTGATT CGTGCTCTGG TACGTTGTAT CAATCTGAGA TCTATCTCTA TCAGGAGCTG CCCTCGCATT GGAGATCAAG GTGTTGCTTT CCTCTTGGCC CAAGCTGGTT CTTACTTGAC GAAACTGTTA CTGATCTTGT GCTTCATGGC CTTCAAGGTG TGAATGAGAA AGGCTTCTGG GTTATGGGAA ATGCAAAAGG GCTGAAGAAA CTGAAGTCCC TCTCAGTAAT GTCGTGCCGA GGCATGACGG ATGTTGGGCT TGAAGCTGTT GGAAATGGTT GCCCTGATCT GAAGCATGTC TCTCTGAACA AATGTTTGCT TGTTTCTGGT AAAGGACTTG TCGCTTTGGC CAAATCTGCA TTGTCGCTGG AAAGTTTGAG ACTTGAAGAA TGCCACAGGA TCAACCAGTT TGGTCTTATG GGTTTTCTCA GGAACTGTGG CTCAAAGTTG AGAGCTTTCT CTTTGGCAAA CTGTCTGGGC ATCAGTGACT TCAACTTAGA ATCACCTCTG CCATCACCCA GTTGCAGCTC TTTACGTTCT CTGTCAATCC GATGCTGCCC TGGGTTTGGG GATGCAAGTC TCACTTTCTT GGGAAATTTC TGTCATCAGC TTCAGGATGT TGAACTTTGT GGACTGAATG GAGTGACAGA TGCAGGTGTA CGCGAGTTGC TTCAGAGCAA CAATGTTGGT CTAGTGAAGG TGAACCTGAG CGGATGTATC AATGTTTCAG ACAACACAGT CTCTGCAATT TCCATTTGCC ACGGACGCAC ATTGGAGTCT CTTAACCTTG ACGGCTGCAA GAACATCAGT GACGCAAGCC TTGTCGCAGT AGCCAAGAAC TGCTACTCAG TCAATGACCT TGACATCTCA AATACTTTGG TCTCAGATCA CGGAATCAAG GCTTTGGCAT CTTCTCCCAA CCATCTGAAT CTTCAGGTTC TTTCTGTTGG TGGCTGCTCA GCGATTACAG ACAAAAGCAA GGCATGCATA CAAAAACTCG GCCGCACGCT TTTAGGACTA AACATCCAAC GTTGTGGCAG AATCAGCAGC AGCACTGTGG ATACTCTTCT CGAAAATCTA TGGAGGTGCG ATATACTCTA CTAAATCCCA CTTTTTCTAC AAAACCGTAG TATCATCATC ATCAGTCCAA GTCTTTTTCC TAGGTTTTGG TCACTAAAAC CCATAGATTC CACCTAGAAC TTAGTTTCTT TCCCAGGACG CAGCGGTTGT TTTTTAAATT TTTTGGCAGG TTCCTTCTAA ACAAAGGAGT CTGCTTCTAC AACCGTTAGT GTTCCTGTGA ATCCTGTCAC TGAGTTCTGG TAATCTAGTT TAGGGTTTAG TCTTGACCGT CTTTTTGGAG TTGTTGTTTC TCTATATTCA GTCAAGTTCT TGTAGAAAGT CCTTTGTTCT TTGGTTTAGG TTCGTGATAG TGCCTTTTAT CTTCTTCCAC TGTAGAGCTT TTGGCAATGG CGGTGTAACT TCTTAATCCG CCATTACGAC TCTTCGGAGT TTTTTTTTTT CTGCCAAAAG CTCTGTTTTT TTCCCACTTT TTTGTTTAAG GCACTATCTT GTATACTTCT GAATCATTGT AACTATGTAC TCTATATTAC TACCCTTTGT AATATAACTT GATCCTTAAT TGGATCATTT TGTTGTG 
Length2447
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10684049.. 10686865
Download Sequence
A.thaliana
AGI-codeAT5G25350.1
DescriptionEIN3-binding F box protein 2
TAIR curator summaryArabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.
Alias[EBF2][EIN3-binding F box protein 2]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg929717 C2 domain-containing protein
11.7473 Ahg922723 cytosolic invertase 1
12.8062 Ahg926577 PATELLIN 1
14.4914 Ahg328525 KNOTTED1-like homeobox gene 5
15.4272 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
21.166 Ahg486867
22.2036 Ahg487182 calmodulin binding
25.0998 Ahg934547 ammonium transporter 2
25.3772 Ahg495589
26.9444 Ahg475320 ABC-2 and Plant PDR ABC-type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression