| Annotation |
|---|
| Description | jgi|Araly1|328525|fgenesh1_pm.C_scaffold_7000752 |
| Sequence |
ATGTCGTTTA ACAGCTCCCA CCTCCTTCCT CCACAAGAAG ACCTTCCTCT CCGACACTTG GCCGATCAAT CACAGCAACC GACGTCGCAG CGTCACTTCT CTGAAACACC TTCGCTTGTC ACCGCCAGCT TCCTCAACCT CCCTACCACA ATAACCACTG CGGATTCCGA TCTCGCTCCT CCGCACCGCA ACGGAGACAA TTCCGTTGCT GATACAAACC CACGGTGGCT CTCCTTTCAT ACGGAGATGC AAAATACTGG AGAAGTTCGT TCTGAAGTTA TCGACGGAGT CAACGCCGAT GGTGAAACGA TACTTGGTGT TGTTGGAGGT GAAGATTGGC GGAGCGCTAG CTATAAGGCG GCGATTTTGA GACATCCGAT GTATGAGCAG CTTCTTGCGG CTCACGTGGC TTGCCTTCGG GTTGCGACTC CTGTTGACCA GATTCCGAGG ATCGATGCTC AGCTTAGCCA GTTGCATACC GTCGCCGCGA AATACTCCAC TCTTGGTGTG GTTGTGGACA ACAAGGAACT TGATCATTTC ATGTCACATT ATGTTGTCTT GTTATGTTCA TTTAAAGAAC AACTCCAACA CCACGTTTGT GTCCATGCAA TGGAAGCCAT TACGGCTTGT TGGGAGATCG AGCAATCACT GCAATCCTTG ACGGGAGTTT CTCCAAGTGA AAGTAATGGT AAGACAATGT CGGAAGATGA AGATGATAAT CAAGTAGAGA GCGAGGTTAA CATGTATGAT GGAAGTTTGG ACGGTTCAGA TTGCTTGATG GGGTTTGGTC CTCTTGTTCC AACCGAGAGA GAGAGATCTT TGATGGAACG TGTGAAGAAA GAACTGAAGC ATGAGCTTAA ACAGGGTTTC AAAGAGAAGA TTGTGGACAT AAGAGAAGAG ATAATGAGGA AGAGAAGGGC GGGAAAGTTG CCGGGAGATA CGACTTCTGT ACTCAAAGAG TGGTGGCGAA CTCACTCGAA ATGGCCATAC CCAACTGAGG AAGATAAGGC AAAACTGGTT CAAGAAACCG GTTTGCAGTT GAAACAGATC AACAATTGGT TCATCAACCA GAGGAAAAGA AACTGGAACA GCAACTCTTC CACGTCATCT ACTCTCAGCA AGAACAAACG TAAACGGTAA |
| Length | 1140 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 3778817.. 3780599 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G32040.1 |
| Description | KNOTTED1-like homeobox gene 5 |
| TAIR curator summary | A member of Class II KN1-like homeodomain transcription factors factors (together with KNAT3 and KNAT4), with greatest homology to the maize knox1 homeobox protein. Regulates photomorphogenic responses and represses late steps in gibberellin biosynthesis. KNAT5 promoter activity showed cell-type specific pattern along longitudinal root axis, primarily in the epidermis of the distal end of primary root elongation zone. |
| Alias | [KNAT5][KNOTTED1-like homeobox gene 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14 |
Ahg951281 | Major facilitator superfamily protein |
| 14.4914 |
Ahg489386 | EIN3-binding F box protein 2 |
| 16.0624 |
Ahg494346 | disease resistance protein (TIR-NBS-LRR class) family |
| 21.5174 |
Ahg496313 | small G protein family protein / RhoGAP family protein |
| 24.8998 |
Ahg327819 | Plasma-membrane choline transporter family protein |
| 27.2213 |
Ahg488026 | SCP1-like small phosphatase 5 |
| 28.1069 |
Ahg486377 | |
| 28.7228 |
Ahg927799 | Target of Myb protein 1 |
| 28.8444 |
Ahg889261 | Myosin family protein with Dil domain |
| 34.3366 |
Ahg944195 | RUB1 conjugating enzyme 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|