Detail



ID : Ahg929717

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929717|scaffold_302174.1
Sequence
CTTGAAGGCG AATTGAAGAG ATGGGTCGGA GAATAAAGAG GAAAGGTCTG ATAAACACGG AAGCTGTTAG AGAGTTTATC AATCATCTAG TTGCTGAGAG ACATTCGCTG TTGTTGCTGG TTCCTTTGGT CTTAGCTTTC TGGGCAATTG AGAGATGGGT CTTTGCTTTC TCCAATTGGG TTCCTCTCGT TGTCGCCGTT TGGGCTTCTC TTCAGTATGG AAGTTACCAA AGGGCAATAC TTGCAGAAGA TCTTACCAAG AAGTGGAGGC AAACCGTTTT CAATGCGTCG ACGATAACTC CATTGGAACA TTGTCAATGG CTGAACAAGT TACTGTCTGA AATTTGGCTA AACTATATGA ACAAGAAACT CTCGCTCAGA TTTTCTTCTA TGGTGGAGAA ACGATTGAGG CAACGAAGAT CAAGATTAAT AGAAAATATA CAATTGTTGG AGTTTTCTCT TGGCTCGTGC CCTCCTTTGC TGGGACTCCA TGGAACTTGT TGGTCAAAAT CAGGGGAACA GAAAATTATG CGATTGGATT TCAGTTGGGA CACAACGGAT CTAAGCATTT TGTTGCAAGC CAAGTTATCC AAACCATTTA ATCGAACAGC ACGAATCGTT GTCAATAGTC TCTGCATCAA GGGCGATATT CTGATCAGAC CGATTCTTGA AGGAAAAGCA TTGCTTTATT CCTTTGTATC GAATCCTGAA GTTAGAATCG GAGTTGCTTT CGGTGGTGGC GGTGGCCAAT CTCTCCCCGC GACAGAGCTC CCCGGTGTCT CCTCTTGGCT GGTAAAGATT CTAACGGAAA CTTTGAACAA GAAGATGGTA GAGCCACGCC GGGGATGTTT CTCGTTACCA GCAACCGATC TTCACAAAAC AGCCATCGGG GGAATCATCT ACGTAATCGT TGTCTCTGGT AACAATCTTA ACCGCAGCAT TCTTCGGGGA AGCCCGTCAA GAAGTTCTGA TATTGGAGAC GGTAGCAGCG GAAATAGCAG CAGCAAACCT GTTCAGACAT TTGTCGAGGT CGAACTCGAA CAACTTTCTC GACGAACCGA GATGAAGTCA GGACCGAATC CAGCTTATCA ATCGACATTT AACATGATCT TACACGACAA TACAGGGACA CTCAAATTTA ACCTCTATGA AAATAATCCT GGGAGTGTCA GATACGACAG TCTCGCTAGC TGCGAAGTTA AGATGAAATA CGTTGGTGAT GATTCAACGA TGTTTTGGGC CGTTGGATCT GATAACAGTG TGATTGCGAA ACACGCTGAG TTCTGTGGTC AAGAAATCGA GATGGTTGTT CCGTTTGAAG GAGTCAGCTC CGGCGAGTTG ACGGTCAGGC TACTTCTAAA AGAATGGCAT TTCTCTGATG GCTCACATAG CTTGAATAGC GTTAATTCGA GTTCATTACA CTCCCTCGAC AGCTCGTCTG CCCTCCTCTC GAAAACCGGC CGGAAAATTA TTGTGACGGT TTTGTCTGGA AAAAACCTTG TTTCTAAAGA CAAGTCCGGA AAATGTGATG CATCCGTCAA GTTGCAGTAC GGGAAAATTA TACAAAAGAC GAAGATAGTG AACGCAGCGG AGAGTGCCTG GAACCAGAAA TTTGAGTTCG AAGAGTTAGC CGGGGAAGAA TATTTAAAGG TGAAATGCTA CAGAGAAGAG ATGCTTGGCA CGGACAACAT CGGTACAGCT ACATTGAGTC TTCAAGGAAT CAATAACAGC GAAATGCATA TATGGGTTCC GCTTGAAGAG GTTAATTCTG GAGAAATAGA GCTTTTGATC GAAGCTATGG ATCCCGAGTA CAGCGAAGCG GATGCTAGTA AAGGCATGAT TGAATTGGTT CTCGTTGAAG CGCGGGATCT TGTGGCCGCG GATCTTAGAG GAACCAGTGA TCCTTATGTT AGGGTTCAAT ATGGAGAGAA GAAACAGAGG ACAAAGGTGA TTTATAAGAC ACTGCAACCA AAATGGAACC AGACAATGGA GTTTCCAGAT GATGGGAGCT CCTTGGAGCT ACATGTGAAA GACCATAACA CTCTGCTTCC GACTTCAAGC ATCGGTAACT GCGTCGTGGA GTACCAAGGG TTAAAGCCAA ATGAGACTGC CGATAAGTGG ATACCTCTCC AAGGAGTGAC ATGCGGCGAG GTCCATGTCA GAGTCACGAG GAAAGTCACG GAGATTCAGA GACGCCCCAG CGCGGGGTCT GGCTCCCCGT TTAACAAAGC TCTGTTGCTG TCCAACCAGA TGAAGCAGGT GATGATAAAG TTTCAGAATT TGATTGACGA TGGAGATCTT GAAGGTCTTT CTGAAGCTTT AGAAGAGCTG GAGAGTTTGG AGGTCGAACA AGAAGAGTAT TTGGTCCAGC TTCAGACAGA GCAAATGCTG CTTATCAACA AGATCAAAGA CCTTGGTAAG GAGATTCTTA ACTCGTCCCC AGTTCAAGCC CCATCTCATT CCCCATCTCG ATAGATATGT AGGGCATTGG ATAA 
Length2494
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7427370.. 7430357
Download Sequence
A.thaliana
AGI-codeAT3G18370.1
DescriptionC2 domain-containing protein
TAIR curator summary
Alias[ATSYTF][NTMC2T3][NTMC2TYPE3][SYTF]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg481093 signal responsive 1
7.74597 Ahg489386 EIN3-binding F box protein 2
9.79796 Ahg491768 autoinhibited Ca(2+)-ATPase 10
12.0416 Ahg948495 Disease resistance protein (TIR-NBS-LRR class) family
14.1421 Ahg946668 importin alpha isoform 2
15.5885 Ahg481956 thylakoid processing peptide
15.843 Ahg475320 ABC-2 and Plant PDR ABC-type transporter family protein
17.4069 Ahg490499 BR-signaling kinase 3
17.5499 Ahg487251 ADR1-like 2
17.8885 Ahg902514 Protein of unknown function (DUF630 and DUF632)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression