Detail



ID : Ahg489406

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489406|fgenesh2_kg.6__2540__AT5G25480.1
Sequence
AAATTAATTT TGTTTAAGCA GAAAAGAAGA AGAAGAATCC ATGGCGGAAG AAGAATTGCA GAGAATCGAT GAGAAGAAGC CATGGCGAAT TCTCGAGTTC TATAGTGGAA TCGGTGGAAT GAGATACTCT TTGATGGCGT CAGGCGTTGT TTCAGAAGTA GTAGAAGCTT TTGAGATTAA TGATTCTGCT AATGATGTTT ATCAACATAA TTTCAAACAT CGTCCTTATC AGGGAAATAT TCAGAGTCTC ACTGCTGTTG ACTTAGATAA GTATAATGCA GATGCATGGC TTCTTTCTCC TCCTTGTCAA CCTTATACTC GACAAGGCCT TCAGAAACAG TCTGGTGATG CTCGGGCTTT TTCGTTTCTC AGGATTCTCG AGCTTATACC GCATACGTCT AAGCCTCCAC AGATGTTGTT TGTAGAGAAC GTTGTTGGGT TTGAGACTTC AGATACTCAT ATGGAAATGA TTGATACGTT AACAAAATTA GATTATGTCA CACAAGAGTT TATTTTGAGT CCGTTGCAGT TTGGTGTGCC GTATTCAAGA CCACGTTATT TTTGCTTGGC CAAAAGAAAG CCTCTGCCAT TTAAGTCCCA ACACAGTAAT AACAAACTAC TCTGGTCTCC AGGCCCGTTA TATGGGTGTG ATGATCAGGT GGAGTTTGGA AAATGTCAAG CAGAAGAAGG ATTGGATAAA TTACTTCAGT TTTGCGAACC AGTAGAGAAG TTTCTCGAGT CAGCTGCACA TGTTGAAGGC GAGCCAAGTA GTGTTGATGA CTCTGAGAAT GGGTCCAAAG ATTGCTATGG ACAAGAAGAC GATTCTGTGC CAGACTCTGT TCATCAATAT CTAGTACCAG TAAGTTTGAT AGAGAGATGG GGAAACGCAA TGGATATTGT TTACCCTGAT TCAAAGAGAT GTTGTTGTTT CACAAAGAGT TATTATCGAT ACGTGAAGGG CACTGGTTCC CTATTGGCAA CTGTTCAGCC AAAAATCAAG GGTAAGGAAT CTTGTTTGAA GGAGCAGCGG CTTAGATACT TCACCCCAAG AGAGGTAGCT AACTTTCACT CATTCCCTGA AGATTTTGAG TTCCCAAAGC ACATAAGCCT TCGACAGAGA TATGCAATGC TTGGAAACAG TTTAAGTGTA GCAGTCGTGG CTCCTCTGCT TCGGTATCTA TTCGATTCTT GACTGCAAAA CTGGAAGCAG TAAGTGACGC TACCAATTAC CTGAACCAGC TATTCGCCCG AACAAGCTTC TCCTACGTTT T 
Length1271
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10779024.. 10781712
Download Sequence
A.thaliana
AGI-codeAT5G25480.1
DescriptionDNA methyltransferase-2
TAIR curator summaryEncodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.
Alias[AtDNMT2][DNMT2][DNA METHYLTRANSFERASE 2][DNA methyltransferase-2]
Gene coexpression
MR
MR Locus Description
16.1555 Ahg341309 Sterile alpha motif (SAM) domain-containing protein
32.8634 Ahg926218 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
36.2491 Ahg334590 Phosphoglycerate mutase family protein
42.107 Ahg892406 DEA(D/H)-box RNA helicase family protein
42.8369 Ahg493618 O-fucosyltransferase family protein
50.7937 Ahg483627 SNF2 domain-containing protein / helicase domain-containing protein
51.3809 Ahg494654 electron transfer flavoprotein beta
52.3068 Ahg893696 zinc finger (Ran-binding) family protein
52.6498 Ahg482011 coenzyme Q 3
56 Ahg491433 Homeodomain-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression