Detail



ID : Ahg489475

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489475|fgenesh2_kg.6__2609__AT5G26360.1
Sequence
ATGCACGCAC CGGTTCTCGT TCTGAGCGAT TCGTTGAAGC GTGAATCTGG AAGTAAGGTT CATCATGGTA ATATCCAAGC TTCCAAGGCT GTGGCTGATA TCATTCGTAC AACATTGGGT CCTCGTTCTA TGTTGAAGAT GCTTCTTGAT GCTAGTGGAG GGATTGTTGT TACTAATGAT GGGAATGCTA TTCTTCGTGA GCTAGATGTT GCTCATCCTG CTGCTAAGTC AATGATTGAG TTGAGCCGTA CACAAGACGA AGAAGTTGGT GATGGGACAA CGTCTGTTAT TGTTCTAGCT GGAGAAATGC TTCATGTTGC AGAAGCATTT ATTGAGAAGA ATTACCACCC CACAGTCATA TGCCGAGCTT ACATTAAGGC TCTCGAAGAT TCAATTGCTG TTCTTGACAA AATTGCTATG TCAATTGATA TCAATGACCG TTCATCAGTG CTAGGATTAG TCAAGAGCTG CATAGGGACA AAGTTCACTA GCCAATTTGG AGATCTAATT GCTGATTTGG CTATTGATGC CACTACTACT GTTGGTGTTG ATCTTGGGCA AGGTTTGAGG GAGGTAGACA TTAAAAAGTA CATCAAGGTT GAGAAGGTTC CTGGTGGTCA GTTTGAGGAC TCGGAGGTTC TTAAAGGAGT TATGTTTAAC AAAGATGTCG TTGCTCCTGG TAAAATGAAA AGAAAGATTG TCAACCCACG GATTATTCTT CTTGACTGTC CCCTTGAGTA CAAGAAAGGT GAAAATCAAA CCAATGCTGA GTTGGTCAGA GAAGAGGACT GGGAAGTGTT GTTGAAGTTG GAAGAGGAAT ACATTGAGAA CATTTGCGTC CAAATACTAA AGTTCAAACC TGATTTAGTT ATTACAGAAA AGGGTCTTAG TGATTTGGCC TGTCACTATT TCAGTAAAGC TGGGGTTAGT GCAATCCGTA GGTTGAGAAA AACTGACAAC AACAGAATCG CCAAGGCTTG TGGAGCAGTG ATTGTGAACA GGCCCGACGA ACTGCAGGAG TCTGATATCG GTACTGGGGC TGGTTTGTTT GAGGTCAAGA AAATAGGAGA TGATTTCTTT TCTTTCATTG TTGATTGCAA AGAACCCAAA GCCTGTACCG TACTCTTAAG GGGACCAAGT AAAGATTTCA TCAATGAAGT GGAAAGAAAT TTACAGGATG CCATGTCTGT TGCAAGAAAC ATTATCAAAA ACCCAAAGCT CGTCCCTGGT GGAGGAGCCA CAGAGTTAAC TGTTTCTGCC ACATTAAAAC AGAAGAGTGC AACAATCGAA GGCATAGAAA AGTGGCCTTA TGAAGCAGCT GCCATTGCTT TCGAGGCTAT TCCACGTACC CTGGCTCAGA ACTGTGGGGT TAACGTGATC CGTACTATGA CTGCATTGCA AGGGAAGCAC GCAAATGGTG AAAACGCATG GACTGGTATT GACGGGAACA CTGGTGCAAT AGCTGATATG AAAGAGAGCA AGATATGGGA TTCTTACAAT GTGAAGGCGC AAACTTTCAA GACGGCGATA GAAGCTGCAT GTATGCTTCT AAGAATCGAT GATATAGTGA GTGGAATCAA GAAGAAGCAA GCTCCTGGAT CTGGACCTTC AAAGCCTACC ATTGAGACAG AAGGAGATGC AGACAACGAA CAAATTCTCC CCGACTAAGC GAAGAGAAAC ACTTTGGTCT CAGTGTGTAA CTCAATCTCT GTTTTCACTT GTTTTATGGT TGCATTCTCC CTTGACATAT CTTCTAATTT TGCAATTTGA CTTGGTGAGA TAAGATTTTT GAGGGTGCGG TTTTATTGTC TTCTTCTGAA TGTTAGCTTT TTTGAATTTT CGTAGTCACT TTGTTGGTTT TAAGAGTGCT AGTTGTTATT GTCTTGTTGA AATTTCTGGC ACTAGAGACT TTTTTTAGTT TGTGACGTTT TTGTTTGAAT ATCATCAAAG TACTTCGACG GGATCTTAAG TTGACCGTTT AGTCTCAAAA TGTGTTTTTG TTTGAACACC ATTAATTGCA TTTCAGACGT ACGGATCGGT TTTTTAGAGT GTTGG 
Length2055
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11305315.. 11308427
Download Sequence
A.thaliana
AGI-codeAT5G26360.1
DescriptionTCP-1/cpn60 chaperonin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg929690 TCP-1/cpn60 chaperonin family protein
2 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
2.44949 Ahg335306 Small nuclear ribonucleoprotein family protein
3.74166 Ahg936501 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
3.87298 Ahg490730 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
4 Ahg489574 MIRO-related GTP-ase 1
4.24264 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
5.19615 Ahg489000 eukaryotic translation initiation factor 2 beta subunit
5.65685 Ahg928899 TCP-1/cpn60 chaperonin family protein
5.74456 Ahg472896 TCP-1/cpn60 chaperonin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression