Detail



ID : Ahg489487

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489487|fgenesh2_kg.6__2621__AT5G26740.1
Sequence
TTGCTTTGCT GTGATAAAGT TCTCTCCTTT CCTTTCTCAA CGAAGAAGAA AGGCTTTTAT CTCAAAACCC TCATCCACAA ATTCCTCTCT TGAGGGTTTT TCTGTTTCTG TTTTGCTTCG TTACTACGGT TACATTGTTC TCTTCGCCTT TCCATATCAA AGAACCCTAT TGATACCTTA AGAAGAGGAA ATTTGAAGAT TTGTTCACAG ATCCGTCTTA GCTCTTTCTT GAGAATGGCG GATTTGATAC CATTTTATCT GAATATTGTG GCGTTTCTAT GTACTGTTGG AGCTATTGCT TTGGCTATAT TTCATATCTA CAGGCATCTT TTGAATTACA CGGAACCAAC TTATCAGAGA TATATTGTAC GCATTATCTT TATGGTTCCG GTTTATGCCT TCATGTCATT CTTGTCTCTT GTGTTACCGA AAAGCTCGAT ATATTTTGAT TCCATACGAG AAGTATATGA AGCATGGGTT ATTTACAATT TCCTATCGCT GTGTTTGGCA TGGGTTGGAG GCCCAGGATC AGTAGTGCTT AGTTTGAGTG GTCGCTCTCT AAAGCCATCA TGGTCTCTCA TGACATGTTG CTTTCCGCCT TTAACATTGG ACGGGCGTTT TATTAGACGA TGCAAGCAAG GTTGTCTGCA GTTTGTTATC CTGAAGCCTA TTCTAGTTGC TGTCACACTT GTGCTTTATG CTAAAGGGAA GTACAAGGAT GGGAATTTTA ACCCTGATCA AGCATATCTC TATCTTACCA TCATCTATAC CATATCCTAC ACAGTGGCTT TGTATGCACT TGTGCTGTTT TATATGGCAT GCAGAGATCT ACTTCAGCCA TTCAATCCAG TACCAAAGTT TGTGATTATA AAGTCTGTGG TCTTTCTCAC CTATTGGCAG GGTGTTCTCG TTTTCCTTGC TGCAAAATCT GGATTCATAA AGAGTGCAGA GGCAGCAGCT CATTTCCAAA ATTTTATAAT ATGTGTCGAG ATGCTTATTG CTGCAGCATG CCATTTCTAT GCTTTTCCAT ACAAGGAGTA TGCTGGTGCC AATGTTGGTG GATCTGGCAG TTTCTCAGGG AGCCTATCAC ATGCTGTAAA ACTAAATGAC TTTTACCATG ACACTGTTCA CCAGTTTGCT CCTACCTATC ACGATTATGT GCTCTATAAC CATCAAGATG GTGGTGACGA GGGAACAAAG AAGTACCGGT CGAGAACTTT TGTGCCAACA GGCCAAGAAA TGGATGCAAT GAGAAAGAAC AAACCCGTGT ATGCAAACAA GATAGATGGT GTTTCGGTTT CAAGTAGTCT ATCTTCAGAG GCAAGCTCAC CAAAAAGCTC TAGCGTAACT TCTGATCCTG CACGCTCTGA TGCTGTGAAA TCTTCATTGC TCGTGGATGC CTCGGATTCT CTTGATACAA TGTATGATAT GTCGCTCATT GACATCGATC TATCTAGTTT CCCCAGCAAT GTACCCTCTG CAAGTGAAAG TGGGCCTAGA TAGGAGCAGA CAAGATGTAG AAATCACCAT TAACAGGTAC AAAACATGCT CCTAATAGTT GGATTCAGGT GAATCATCTG AGGTGTGTTC TTAGTTGGAG AAGATGTTGT TAGTTGGAGA CTCGAGGATA AATGAAAAAG CTTATAAAAC CATTTACCTT TTGTAGCTTT ATACAATGAG TCTTCTACTG GCATTTTCTT TTG 
Length1703
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11337827.. 11340616
Download Sequence
A.thaliana
AGI-codeAT5G26740.1
DescriptionProtein of unknown function (DUF300)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg938705 INO80 ortholog
16.7332 Ahg483034 Microsomal signal peptidase 25 kDa subunit (SPC25)
24.6779 Ahg488997 RING/U-box superfamily protein
25.3772 Ahg920262 Protein of unknown function, DUF647
30.7896 Ahg935895 Tetratricopeptide repeat (TPR)-like superfamily protein
31.0161 Ahg495713
39.6485 Ahg476794 ARM repeat superfamily protein
44.2719 Ahg324763
44.4072 Ahg907677 EXORDIUM like 5
57.8014 Ahg470941 Presenilin-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression