Detail



ID : Ahg489548

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489548|fgenesh2_kg.6__2682__AT5G27840.1
Sequence
TTTTAAGACA AAATAGATTT GTAAACTTCT GGGCTCTCTT CGTTTGACCC ACATTTTCTC GGGAAAAAAT CGTCTGATTT CTCCGATCGG TTCTTCATTG ATCGGAAAAC CAACCACGAC CCATTATTCC TCGCCTGTTT CTGGCGCAAA CCCTTGTATC AATTTTGGAT TTTGGTGAGA AAAATTTAGG GATCTGAAGA GAAAGAACAC GATGATGACG AGTATGGAAG GGATGGTGGA GAAAGGAGTA TTGGATGATA TTATAAGAAG ATTGTTAGAA GGTAAAGGAG GCAAACAGGT TCAGCTTTCC GAGAGCGAGA TTCGTCAACT CTGCTTTAAC GCTCGTCAAA TCTTCCTCTC TCAACCTAAT CTTCTCGATC TCCATGCCCC AATTCGTATC TGTGGTGATA TCCATGGCCA GTATCAAGAT CTTTTGAGGT TATTTGAATA CGGAGGCTAT CCTCCTTCAG CAAACTATCT ATTCCTTGGT GATTACGTTG ACAGAGGCAA GCAAAGTCTT GAGACCATAT GTTTGCTTCT TGCTTACAAG ATTCGGTATC CGTCGAAGAT ATATCTGTTG AGAGGGAACC ATGAGGATGC TAAGATCAAT AGGATTTACG GGTTTTATGA CGAGTGCAAA CGGAGATTTA ATGTACGACT TTGGAAGGTG TTTACTGATT GCTTCAACTG TTTACCCGTA GCTGCACTCA TTGACGAGAA GATACTGTGT ATGCACGGTG GGTTGTCACC AGATTTGGAC AATTTGAATC AGATTCGAGA GATTCAGCGG CCTACAGAGA TTCCAGACAG TGGTCTTCTT TGTGATTTAC TTTGGTCAGA TCCTGATCAG AAGATTGAAG GGTGGGCTGA TAGTGATCGA GGTATCTCTT GCACTTTTGG AGCCGATAAA GTCGCTGAGT TCTTGGATAA GAATGATCTT GACCTCATTT GCCGAGGACA TCAGGTAGTG GAAGACGGGT ATGAGTTTTT CGCAAAACGG AGATTAGTCA CGATATTCTC AGCTCCAAAC TATGGTGGGG AGTTTGACAA CGCTGGTGCA TTATTAAGCG TGGATGAGTC TCTTGTTTGC TCCTTTGAGA TTATGAAACC CGCCCCAGCT TCAAGCAGTC ATCCTCTCAA GAAGGTACCG AAAATGGGGA AGTCTTGAAT TTCTAGTTCT CTCTCTCTCT CTGTTCCACT TCCACAGCTC AAGCTAGGCA AAAGATTCAG ACTGTCATTA TAACTGTGTT TGTGTCTCCA GTTATGTGTT GAATGCAATG AAGAACCCAA AGGGTACTTA GTCTGTAAAA AACCAAAAAA GTGAGAAAAC AAAAACACAC TTCGTTTTCT TTGTATAGAT GCAGAATGAT CTGTCTTCTG CTTCTGGGGA TTTTATCTCC TTATTAGTCT CTTTTCTTTC TTCTTTTAGC CCTTTTAGTT TAATTTTTTT TCCTTGTTGT ACAAACCCTT TTGCAT 
Length1476
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11825785.. 11827886
Download Sequence
A.thaliana
AGI-codeAT5G27840.2
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
TAIR curator summaryencodes a serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.
Alias[TOPP8]
Gene coexpression
MR
MR Locus Description
2 Ahg910174
12.6095 Ahg473395 Transcription elongation factor (TFIIS) family protein
16.7332 Ahg491404
18.8944 Ahg491436 La protein 1
19.975 Ahg949816 dentin sialophosphoprotein-related
20 Ahg480553 Iron-sulphur cluster biosynthesis family protein
20.3715 Ahg479633 alpha-mannosidase 2
24 Ahg487444 ARM repeat superfamily protein
25.0998 Ahg480909 Tetraspanin family protein
37.229 Ahg318738
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression