| Annotation |
|---|
| Description | jgi|Araly1|473395|fgenesh2_kg.1__3349__AT1G32130.1 |
| Sequence |
ACAACTCGAA GATCAAAGTA TTCGTAAATT CTCTCTTTCG AATCATTTTC TGGAAGCTGA GAAGAAATGG GTTTCGAGGA TGATCCGTAC CGTGATGTAG ATGGAGAGCC AATAGTGGAC TTTGATGACT TTGGAAATGA TCGTGAGCAA TCAACAGAGC CACTTCAGGA TTTTGATGAA GATTTGGCTG ATGATATTGG AGATTGGGAT GGTGAAGGGT CACAAACACC TGTTTATGAT AATGATAAAG TAGCTAAACC GAGGAAGAGG TTGGTGAAGA AAGCTTCTAG TGAACGTGAG ACTATTGATG TTCCTGAATT GATTGATGAG GATGTGGAGG ATGCTGAGTT TGATGAGTTT ATGGGAGGAA GAGGTGGTGG TGGTGGTACT GATTATGATG ATAAGGTTGG TAGGAAGAGG AAGAAGGAGA AAGATCGAAG TAGTAGTGGT AGTGGGAAGG AGAAGAGGCA TAAGTTCCCG AACCGTGGCG AGAGGAAGTC AGAAGAGATT GATGAGATGT GGAAATCTAT TGCTCATAAC CCTGAGAATG ATGAAGAAGG TGTTAGGACT ATGGATGACG ATAATTTCAT TGACGATACT GGTTTGGATC CTTCTGAGAG GTATGGAGGT GACGCTGGAG ACCGCTCTCC AACTCATTAT CCTCAGGCAG AGGAGGGTGA GGATGATGAT GAGGTGAATA ACCTTTTCAA AATGGGGAAG AAAAAGAAAA AGACTGAAAG AAATCCTGCG GAAATCGCTC TCTTGGTTGA GAATGTGATG GCTGAGCTTG AGGTTACTGC TGAGGAAGAT GCAGAACTTA ATAGACGGGG GAAGCCTGCT ATCAACAAGC TTAAGAAACT TTCGCTTCTT ACCGATGTAC TTGGAAAGAA GCAGCTTCAA ACAGAATTCC TGGACCATGG AGTTTTAACT CTGTTGAAGA ATTGGCTTGA GCCTCTTCCA GATGGAAGCT TGCCAAATAT CAACATCCGT GCAGCTATTC TAAGAGTTCT TACTGATTTT CCGATTGACT TGGACCAGTA TGATAGAAGG GAGCAATTGA AAAAGAGTGG GCTTGGAAAG GTCATTATGT TCTTATCAAA GTCTGACGAG GAAACTAATT CCAACAGACG ACTTGCTAAG GATTTGGTTG ATAAATGGTC TCGTCCAATT TTCAACAAGA GTACTAGGTT TGAGGACATG AGAAATCTCG ATGAAGATAG GGTTCCCTAT AGAAGGCCAC CAGTGAAGAA ACCTAGCAAC AAAGCGACAA TGGAGTCCAG AGATGGTGAC TTTGACTTGG AGATTCGGGA ACGTAAAACT GGTCTGACTT CTGGTCAGAG TTCAAGGGGA GACAGGCAAA TGACGATGAG GCCGGAAGCA ACCCCATTGG ACTTTTTGAT CCGTCCTCAA TCCAAGATTG ACCCGGATGA GATCAGAGCC CGTGCAAAAC AGGGCTCTCA GGACCAGCGT CGGGTCAAGA TGAACAAGAA ACTTCAGCAG CTAAAAGGAA CAAAGAAAAA GCGGCTGCAA GCCACGAAGG TGAGCGTGGA AGGTCGGGGT ATGATCAAGT ACCTGTAGAG AGTTTACAAC CAAACCAGAC CATCAAGCCA CATTGGAACT GGTTCTTCTA TCGTGTTAAT CTTCCAACTT TGCTTGGATC AGTGTTTAAA AAGGTCTTCC AGGTGAAGTC AAAGACTTGA TGCATTGGGG TTTATACTTA TATGTACTCT TCTATATATG GTTTGCTTTG AGCCTCTTTC TAATGTAATT GGAAAGTGAA AACATTACGT TCGTCACTTA CTTCTTGAGA GCAGATACAT TCTTCTATTA TGGTAATCAA TTTTCAGT |
| Length | 1848 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 13862950.. 13865830 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G32130.1 |
| Description | Transcription elongation factor (TFIIS) family protein |
| TAIR curator summary | The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression. |
| Alias | [ATIWS1][HNI9][IWS1][ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6)][HIGH NITROGEN INSENSITIVE 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.78233 |
Ahg472958 | |
| 9.53939 |
Ahg322062 | RNA-binding protein |
| 10.4881 |
Ahg945681 | NAD(P)-binding Rossmann-fold superfamily protein |
| 12.6095 |
Ahg489548 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| 13.0384 |
Ahg947205 | Nucleic acid-binding, OB-fold-like protein |
| 13.0767 |
Ahg358320 | leo1-like family protein |
| 17 |
Ahg490906 | |
| 17.6352 |
Ahg476240 | RNA polymerase II transcription elongation factor |
| 20.6882 |
Ahg489223 | |
| 20.8087 |
Ahg478299 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|