| Annotation |
|---|
| Description | jgi|Araly1|892424|Al_scaffold_0006_420 |
| Sequence |
ATGTTCATGA TTCATGCCAA GAACTCTTCT AAATCTAGGC ATAAGAGGCC TCGAATAGTT CTAAGTCTAA CTAATCTAAA TGTATTGTGT TTAACAAAAT GTGTTGAAGT TAGGAATGGC CCAGCGCATC ATATCTATCC TGGTGAAGGC AGGCCTCTTA TAATTGGGGA CGACCAGCCC TACGTACATT TCATCTCTCA GGTTGCTTTA GGAGAGAATC AGAACAATGG AACCGAACCA ATCCAGCTTT ACCTGATAGT TGGATCGGCT AAGCGTCTCA TTGGAACGCT ATCTCATGAG AGGTTTCCTC AGCTGGCTAC GGCGATTGTG TTGGAAAGGC ACTTTTCGCT GTCTCATACT TGGAAGAATG GGAGCGTTTT CTTCTCTGAT GATGTTATTG ATGTTGATGG TCATGATGAT TATGATGATT GTGATTTTGA AGACTCTGGA GAGGAAGAGG AAGAGAAGCT TACTGCTGAA GCTGACAGTG AGGAAGATGA TGAAGATGAC TCATCAGACG ACGAAGTAGA TGACTCATCA GAGGAGGAGA CCCCAAAGAA GCCTGAAGCA TCCAAGAAGA GATCTGCAGA AGCCAACTCC TCCAAGAACC CTGCTCCCAA CAAGAAGGCT AAGTTTGAAA CTCCTCAGAA AACAGATTCG AAGAAACCGC ATGTCCATGT TGCAACTCCT CATCCATCAA AACAGGCGGG TAAGAATTCT GGTGGAAGCA GCATTGGAGA GACTTCGAAG CAGCAGCAGA CACCGAAGTC TGCAGGAGCA TTTGGGTGCA AGTCGTGCAC CAGAACCTTC ACTTCGGAAA TGGGATTGCA GTCTCACACA AAAGGCCAAA CACAGTGCAG CTGCTTAAAA AGAAGAAGAA GCAGCTTGAT GACTACTCTC TATAATATCT ACTCTAGAAC TTTGATGTCT TTTGGTACTT AA |
| Length | 942 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1725879.. 1729241 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03740.1 |
| Description | histone deacetylase 2C |
| TAIR curator summary | HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression |
| Alias | [HD2C][HDT3][histone deacetylase 2C][HISTONE DEACETYLASE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 15 |
Ahg489556 | Protein of unknown function (DUF1624) |
| 16.9706 |
Ahg477718 | Nucleotidylyl transferase superfamily protein |
| 30.1662 |
Ahg490420 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 35.426 |
Ahg945657 | transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) |
| 38.1576 |
Ahg483814 | |
| 43.8178 |
Ahg479995 | Galactose oxidase/kelch repeat superfamily protein |
| 47.244 |
Ahg485847 | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| 47.3709 |
Ahg489241 | DOMAIN OF UNKNOWN FUNCTION 724 10 |
| 54.7723 |
Ahg915235 | Homeodomain-like superfamily protein |
| 58.1464 |
Ahg471687 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|