Detail



ID : Ahg943758

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943758|scaffold_604302.1
Sequence
GAAAAAAAAA AAAAGAAACC ATGGAAAATC GCCATCTCCC ATCCAAATTC TCCTTCTCTG GCTCATCCAT GGCTCAGAAT CAACTTATCG ATTCCCTCAC ATCTCACATA TCTCTGTACC ACTCCCATTC TTCTTCCTCT TCCATGGCTA ATACTAGCCC CAATCCTAGG TCGGCGATCC TCCGATGGTT CTCTTCTCTC AGCGTCCACC AGCGCCTCTC TCACCTCACC TTCGTTGATC CCAAGTTCGT CCAAATCCTC CTTCAGATGC TTGGTTATAT CCGCACCAAA GGCCCTGGCT CTTTCATCAT CCTCCCAGAC CTCCCTTCCT CCGATCTCCC CAGTCTCTGC TTTAAAAAAT CTCGTGGCTT AATCTCCAGG GTTGCCGAGT CTAACGAGCC AGAGCGTTTC GTTTTCGACT CCACTCGGCT CTTTGGTTCT AGAGAAGGGG AAAGTGCTCA AGATTGCTCT TGCTCCGTCA ATTCCCTCGA TTCCGTCGTC ATGGCCTATG ATCTTCTTAC GAATGTGGAT CGTTTTGTGG AGACTATGGA TGCTTTATCG AATGGAGCAT TTTTGAGAGG AGAAGAGAGT GATTTGGGTT CCAATTGGGT AGAATTGGAG TGGCTTAAAG CCAAAGGCTA TTATAGCATG GAAGCCTTCA TTGCTAATAG GTTAGAGGTA AGCTTGAGAT TAGCTTGGCT GAACACCAAT AGTGGCAAGA GAAGAGGAAT CAAATTGAAA GAGAAATTGA ATGCTGCTGC TGCGGCTGCC AATTCGTATT GGAGGAAGAA GGCCTGTGTT GATTGGTGGC AGAATTTGGA TGCCGCAACA CACAAGAGAA TCTGGACTTG TTTGTTGGGG AAGTCGGCTA AGTCTGTGAT ATATGAGATT CTCAGAGAAG CAAATCAAGC ACAGCAGGGA GATATGTGGC TCTTCAATTT TGCAAGTGCA AGGAAAAGGC GTACAGACAC TTCTGCAGTT TCATTCTGTG ACATGATTTT GGAACCAAAC TCTGTATCAA GGAAACCTGT TACCCTAGCC AGTAATTTAA GTGGCTTATA CGTTCTTCAA GAATTTGCTT CGCTGCTCAT CTTATGCCAA AATGGCTTAG TTCCAGTACA AAGCGTATTT TTCAGCTCAT TGGGTACTAT CACAACCTTA GTGGATTGCA TCTTAAGAAA ACTGCGGGGT TTTCTTATGG TAATCTCTAT TGATTCCGTT AAAGTTGAAC TTCTTGATGA CAACACGCAC AAGTGTTCTC CAAGTTCATC ATCCAATCAG AAGCTTTGTT CGACCAGCCG TAAACACAAA GGAAAGACCA GGAACTTGAA AAAGCCTACT CCCGAGGCTA CATCTGATAA AAATGTTAAT TTGTCCACGA AAAGCGGAAA GAAAGATCAA GCTAAATTGG AATTTAACAA AAACAGAGAA GCGATAGAAT GCAAGAAAGT TCCTACAGCT TCAACGAAGA TCAGTAGTCC TGCGGCCTCT GCAGCAACTA TGGTGAATTA TTTTCTTTCC TCATATTTTG GATGAATTGA ACTCGGGTTG TTTTGA 
Length1556
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23474085.. 23476105
Download Sequence
A.thaliana
AGI-codeAT4G00060.1
DescriptionNucleotidyltransferase family protein
TAIR curator summary
Alias[MEE44][maternal effect embryo arrest 44]
Gene coexpression
MR
MR Locus Description
13.784 Ahg473467 RING/FYVE/PHD zinc finger superfamily protein
15.1987 Ahg942565 F-BOX WITH WD-40 2
16 Ahg489556 Protein of unknown function (DUF1624)
25.3377 Ahg321074 RNA-binding (RRM/RBD/RNP motifs) family protein
29.7489 Ahg494293 RNA-binding (RRM/RBD/RNP motifs) family protein
42.1426 Ahg331395 zinc knuckle (CCHC-type) family protein
42.332 Ahg472977 TBP-associated factor 4B
45.2327 Ahg496018 Protein kinase superfamily protein
47.7493 Ahg486802 Thioredoxin superfamily protein
47.8121 Ahg894721 Frigida-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression