Detail


ID : Ahg489694

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489694|fgenesh2_kg.6__2828__AT4G07960.1
Sequence
CGCGTGTGAT CATTAACTCG AGGTAAATTC TCTAATCCCA GTTAATATCA CACGCGGAAT ATCAAAGATC CGATTTGTAC ATTGTACCAA CATCAGAGGA GGTTTAAAGT GGAGTATTTG GAAGAACAAC AAAGCCAATA ACACGCGTCT CCTTCAATCC TCTCGCTGTC AATGAGATCC AAAACAAAAA TGGCACCAAA GTTTGAATGG TGGGCTAAAG GAAACAACAA CAACAACCGT AAAGGAACAC CAGTCGTCGT CAAAATGGAA AACCCTAATA ACTGGTCAAT GGTGGAACTT GAATCACCTT CTCATGACGA TTTCCTCGTA AGAACTCATG AGAAATCTCG TAACAAGAAC GCAAGACAGC TCACTTGGGT TCTACTTCTT AAAGCTCACC GTGCCGCAGG TTGTCTCACT TCTCTCGGTT CTGCATTAAT CGCTCTCGGC ACTGCCGTAC GCCGCCGTAT CGCCGCCGGC CGTACAGACA CTGAAATCTC CTCCTCCTCC GGAGTACAGA AGCAAAACCC TGCGAAAAAA TCGAAACTTT TTTACTCTTG CTTAAAGGTG TTTCTATGGC TTTCTTTAAT CCTTTTGGGT TTTGAGATTG CTGCTTATTT CAAAGGTTGG CACTTTGGAA CTTCTAAGCT TCAGCTTCAG TTTATCTTCA ATAAAGGATT CTTTGATTGG GTTTACACGA GATGGGTTTT GCTTCGTGTT GAGTATCTTG CTCCTCCGCT TCAGTTTCTT GCTAATGGCT GCATCGTTCT GTTTCTTGTT CAGAGTCTTG ATAGACTCAT TCTTTGTCTT GGTTGTTTTT GGATCCGTTT CAAGAAGATT AAACCGGTTC CTAAACCAGA TTCTATCTCT GATCTTGAAT CTGGTGACAA TGGTGCCTTC CTCCCTATGG TTCTTGTTCA AATCCCTATG TGTAATGAGA AAGAGGTTTA TCAGCAATCA ATTGCTGCTG TTTGTAACTT AGACTGGCCA AAAGGGAAGA TTTTGATTCA AATTCTTGAC GATTCGGATG ATCCGATAAC GCAGAGTTTG ATTAAAGAAG AGGTTCATAA ATGGCAGAAT CAAGGTGCAC GCATTGTGTA TCGTCACCGT GTTAACAGAG AAGGTTACAA AGCTGGTAAT CTTAAGTCTG CTATGAACTG TAGTTATGTT AAAGACTACG AATTCGTCGC GATTTTCGAC GCTGATTTTC AACCTCTACC TGATTTCCTC AAAAAGACAA TTCCTCATTT TAAGGATAAT GAGGAACTAG GATTGGTTCA AGCGAGGTGG TCCTTTGTGA ATAAGGAAGA GAATTTGTTG ACACGATTAC AGAACATTAA CTTGGCTTTT CACTTTGAGG TTGAGCAGCA AGTGAATAGC GTCTTCTTGA ATTTCTTTGG ATTCAATGGA ACAGCCGGTG TCTGGAGGAT CAAAGCTTTG GAAGATTCTG GTGGTTGGCT CGAGAGAACT ACCGTCGAGG ATATGGACAT TGCTGTTCGT GCTCACCTTC ATGGATGGAA ATTCATTTTC CTAAACAACG TTGAGTGCCA ATGTGAATTA CCGGAATCGT ATGAAGCTTA CAGAAAACAG CAACATAGAT GGCATTCAGG ACCTATGCAA CTATTTCGCC TTTGTTTGCC GGCTGTCATT AAATCAAAGA TAAGCATAGG AAAGAAATTC AATCTGATAT TCCTCTTCTT CCTCCTGAGG AAGCTTATCT TGCCATTCTA CTCATTTACC CTCTTTTGTA TTATCCTGCC AATGACTATG TTTGTACCCG AGGCTGAGCT TCCCGCTTGG GTTGTTTGCT ACATACCTGC CACAATGTCG TTCCTCAACA TCCTTCCCGC CCCGAAGTCA TTTCCGTTTA TAGTCCCGTA CCTTCTCTTT GAGAACACAA TGTCTGTGAC CAAGTTCAAC GCAATGGTCT CGGGTCTATT TCAGCTAGGA AGTGCTTATG AATGGGTTGT TACAAAAAAA TCTGGACGAT CATCGGAAGG CGATCTTGCT GCTTTAGTTG AAAAAGACGA AAAGAAAACG AAACATCAGA GAGGTGTGTC TGCACCCGAA ACCGAAGCCG AGAAAAAGGC GGAAAAGACA AAGAAAAAGA AGAAGAAGCA CAATAGGATA TATATGAAGG AGCTATCACT AGCGTTTCTG TTACTGACTG CAGCAACTCG AAGTCTTTTA TCGGCGCAAG GAATCCATTT TTACTTCCTC TTGTTTCAAG GAATCTCCTT CTTACTTGTT GGTCTAGATC TAATTGGAGA GCAAGTTGAA TGACACTCAA AGAGACTGAA GTAGTGCTTG TAGAAGAGAC GTTGTAGAAG ACAGGAACAT GAAGAGAAGA AGGAAAGGGT CTGGACCCAA AAGAATACAA TACATCATTG AACATAGATC GGTTTCACTA AGGAAGGACA TGAATTAACT CTGTGGTAAT GTGTAAGGTT TTAACTTTTC TTTCTTTTGG GTTTGGCCAC AGTTGTTTAT TCTTTCGTTT AATGGGGACA ATTCTTTTGT AAGAAAGTCT TGTTCAATTA AGAAAGCAAA TTATTTTAGC TC
Length2562
Protein Sequence
Protein Residue
Map Locationscaffold_6: 16692154.. 16695530
Download Sequence
A.thaliana
AGI-codeAT4G07960.1
DescriptionCellulose-synthase-like C12
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLC12][CSLC12][CSLC12][Cellulose-synthase-like C12][CELLULOSE-SYNTHASE LIKE C12]
Gene coexpression
MR
MR Locus Description
20.7846 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
22.2711 Ahg488391 membrane-anchored ubiquitin-fold protein 2
32.8329 Ahg485364 myb domain protein 77
42.7551 Ahg949754 Integrase-type DNA-binding superfamily protein
52.4786 Ahg474889 Pentatricopeptide repeat (PPR) superfamily protein
57.6888 Ahg491115
60.9754 Ahg314206 F-box and associated interaction domains-containing protein
70.1498 Ahg920164 beta-1,4-N-acetylglucosaminyltransferase family protein
75.233 Ahg945608 Protein of unknown function (DUF579)
79.2969 Ahg482489 VQ motif-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression