Detail



ID : Ahg489715

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489715|fgenesh2_kg.6__2849__AT4G08960.1
Sequence
TCGTTACGTC TCTGTAAACA CTTCGAAAAT GGAATCTTCA AAGGAACAAC AAAACACGCC GGAGAAATCA ACCTCCGAAG CTCCGGCCAC CGTTCCCTCC GCCTTTCCTC CCTCCGGTTG CTGTACAAAG TGCGGCGGAC CAACGATTTC CGAACCACCA CCACTCGCTT CATTCCCGGA GATGTCACCA CCACCAAACT ATCGCCCGAT CCGAGCTCCA GCAATCAATC TCCCTTACAA CTCTCAAGCA ATAATCCTCT CTCCAGTTCC TCACGCCGAA CAAGTCCCCG TCGTATCTCC GCCGTATCAA TTCCAATCTC CCGTCAAAAG AATCCACTCT CCCGACGATA TCCGCCGATT TCACGAATCT GCATCTTGTA AGAACTTCTT AGGATTCGTA GTATCTCTCT CAGAATCGAT CCGTGGATAT AAGATCTCAG ATCCTTGTGA TATCTCACCA ACCGTCGCCG CCATAGTTTC AACCCTTGAA ACTTTGTTAC AATGGATCGA TGAGATTCCT CCTGCTCAAC AATCGGCTCG ATACGGTAAC GTTTCGTTTA GGTCATGGCA TGAACGGCTT GGTGAGAGAG GTGAATCGCT TATTCTTGAG TTTCTTCCTG AGGAATTTAA AGAATCTATA ATCGAGATTG TCCCTTACTT CTTCGATAGC TTTGGGAACT CAAGTAGGAT TGATTACGGA ACCGGACACG AGACGAATTT CGCGGCTTGG TTGTATTGTT TAGCTAGGAT GGGGATTGTG AAAGAAGAGG ATTATCATGG TTTGGTGGCT AGGGTTTTTG TTAAGTATTT GGAGTTGATG AGGAAATTGC AAATGGTTTA TTGCTTAGAA CCAGCTGGAT CTCATGGAGT TTGGGGACTT GATGATTACC ATTTCTTGCC ATTCATATTT GGGAGTTCTC AGTTGATTGA TCATAAGTAT ATGAAACCGA AATCGATTCA TAACGATGAT ATTTTGGAGA ATTTCTCTAG TGAATACATG TACTTGTCTT GTATCGCATT TGTGAAGAAG GTGAAGAAAG GTTTGTTTGC TGAGCATTCG CCGTTGTTGG ATGATATAAG TGGTGTACCG AACTGGAAGA AAGTGAATAG CGGTTTGCTT AAGATGTATA GAGTTGAAGT GCTCGAGAAA GTTCCGATTA TGCAGCATTT CCTCTTTGGC TGGCTCATCA AATGGGAAGA GTGATTTACT TCAGTGCCAT AAATGGAAGC AGGGACAACG ATTTTCTCTT CCTTGAGGTG GCTTAACATA AAGTAGAGAC GCCTTTGCTT TTGCATGTAT CTGATACGCA TGCCATCTGC TTCTTGTATT CTCTGTGTTT TAAACTTCAC ATTGTCTTTT T 
Length1361
Protein Sequence
Protein Residue
Map Locationscaffold_6: 16864574.. 16866565
Download Sequence
A.thaliana
AGI-codeAT4G08960.1
Descriptionphosphotyrosyl phosphatase activator (PTPA) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.91608 Ahg496915 mitogen-activated protein kinase kinase kinase 5
8.3666 Ahg946473 RAB GTPase homolog 1C
9.32738 Ahg944199 BES1/BZR1 homolog 2
10.3923 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
10.583 Ahg929508 Tetratricopeptide repeat (TPR)-like superfamily protein
22.1359 Ahg490543 ARM repeat superfamily protein
26.2298 Ahg934753 Integral membrane Yip1 family protein
28.4956 Ahg495041 Protein of unknown function, DUF647
31.1288 Ahg930770 Nucleic acid-binding, OB-fold-like protein
31.4325 Ahg488476 RNA binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression