Detail


ID : Ahg489836

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489836|fgenesh2_kg.6__2970__AT2G17980.1
Sequence
TGGGTTTGAA TTTTCTCTAG ATCTCTTTGT TTCTGCTGTT TTTCATTGTT GGATCTGCGT TTCGCAAAGG GAGATACAGA GAGGAATAGC TCAGAATTGA CAAGTTGTTT TTTTTCTCTA ATCCAGCGAA TCTCAAGCTT CCATGGCTCT CAATCTCCGT CAGAAACAGA CTGAATGTAT AATCCGTATG CTAAATCTGA ATCAACCTCT GAATCCAAGT GGAACTGCGA ATGAAGAAGT TTACAAGATC TTGATCTACG ACACATTCTG TCAAAACATT CTATCACCAT TGATCAATGT CAAGGATCTG CGTAAGCATG GAGTTACACT CTACTTTCTC ATAGACAAAG ATCGAAGGCC CGTTCATGAT GTCCCTGCTG TCTTCTTTGT TCAACCCACT GAATCCAACC TACAGAGGAT CATAGCTGAT GCTTCTAGAT CTCTCTACGA TACCTTTCAT CTGAATTTCT CGTCTTCGAT CCCTCGCAAG CTTCTTGAAG AGCTAGCTTC CGGGACTCTC AAATCTGGTT CTGTTGATAA AGTCTCGAAA GTGCATGATC AGTATCTGGA GTTTGTGACT TTGGAAGATA ACTTGTTCTC TCTGGCTCAG CAATCTACTT ATGTTCAAAT GAATGATCCA TCAGCCGGGG ATAAAGAGAT CGAAGAGATA ATCGAAAGGG TTGCTAGTGG TTTGTTTTGT GTCTTGGTAA CGCTCGGTGT TGTCCCTGTT ATCCGGTGTC CTCGTGGTGG ACCGGCAGAG ATGGTGGCTT CTTTGTTGGA TCAGAAACTG AGGGATCATC TTTTGTCCAA GAACAATCTG TTTACTGAAG GTGGCGGTTT CATGAGCTCG TTTCAGCGTC CGCTCTTGTG CATTTTCGAT AGGAATTTTG AGCTCTCGGT TGGGATTCAG CATGATTTCA GATACCGGCC TCTTGTTCAT GACGTTCTCG ACTTAAAGCT CAACCGATTG ACCGTGCAGG CAGAGAAAGG AGGAAAGAAA TCGTTTGATC TGGACAGTGC TGACCCATTC TGGTCAGCAA ACAGTTCTCT GGAGTTTCCA GAAGTCGCTG TGGAGATTGA AACGCAGTTG AACAAGTACA AGAGAGACGT GGAGGAGGTT AACAAGAGAA CCGGCGGTGG GAGTGGCACT GAGTTTGATG GGACAGATCT GATCGGAAAC ACCAAACATC TCATGGACGC TGTGAATTCG CTCCCGGAAT TAACTGAGAG AAAGCAAGTG ATTGACAAAC ACACCAACAT TGCAACCGCG CTCCTAGGAC AGATCAAGGA GAGATCTATC GACGCTTTCA CTAAGAAAGA AAGCGAGATG ATGATGAGAG GTGGAATCGA CAGAGCTGAA CTTATGGCTA CTCTAAAAGG CAAAGGTACA AAGATGGACA AGCTCCGGTT TGCAATCATG TACTTGATTT CCACAGAGAC CATAAACCAA TCCGAAGTGG AATCCGTGGA AGCAGCATTG AACGAAGCCG AGGCTGACAC AAGCGCGTTT CAGTACGTGA AGAAAATCAA ATCCTTAAAC GTATCTCTTG CAGCTTCTTC AGCGAACTCA GCGAGTAGAA GCAACATTGT AGACTGGGCC GAGAAGCTTT ACGGACAGTC TATAAGCGCA GTCACTGCAG GAGTGAAGAA TCTGTTATCT AGTGATCAAC AATTGGCAGT GACTCGAACC GTTGAAGCTT TAACAGAAGG AAAACCAAAC CCAGAGATTG ACTCTTACCT CTTCCTGGAC CCAAGAGCTC CAAAGTCTTC TAGCTCCGGT GGTAGCCACG TGAAGGGACC GTTTAGAGAA GCTATAGTGT TCATGATCGG TGGAGGTAAC TATGTTGAGT ACGGGAGTTT GCAGGAGCTG ACTCAGAGAC AGTTAACCGT TAAAAACGTT ATATATGGAG CCACTGAGAT TCTTACCGGA GGTGAATTGG TGGAACAGCT TGGACTTTTG GGAAAGAAGA TGGGATTGGG AGGTCCGGTC GCTTCAACGT CATCGTCTGG TCACTGAGTG TTAGACACTG TTGCTTTCTT TTTTTCTTTT GGCTTTTCAG AG
Length2062
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18761178.. 18763406
Download Sequence
A.thaliana
AGI-codeAT2G17980.1
DescriptionSec1/munc18-like (SM) proteins superfamily
TAIR curator summarymember of SLY1 Gene Family
Alias[ATSLY1]
Gene coexpression
MR
MR Locus Description
2 Ahg947352 Exostosin family protein
12.0416 Ahg951196 Glycosyl hydrolases family 31 protein
19.4422 Ahg485946 beta-hexosaminidase 1
19.5192 Ahg476853 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
20.199 Ahg920678 myosin 1
21.9089 Ahg494617 Protein of unknown function (DUF3741)
28.2489 Ahg473698
30.1993 Ahg332797
36.2767 Ahg473858
37.8286 Ahg477223 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression