| Annotation |
|---|
| Description | jgi|Araly1|920678|scaffold_101959.1 |
| Sequence |
ATCTGGGGTT TGCTTTTCAA ATGGCTGCTC CAGTCATAAT TGTGGGTTCA CATGTGTGGG TTGAAGATCC TCATTTGGCA TGGATAGATG GAGAAGTTAC TCGAATCGAT GGTGAAAACA TTCACGTCAA AACTAAGAAG GGGAAAACCG TTGTGACAAA CGTATATTTT CCCAAGGATA CTGAAGCTCC ATCTGGAGGT GTAGATGACA TGACAAAGCT TTCATACTTG CATGAGCCTG GAGTCTTACG AAACCTTGAG ACAAGATACG AACTTAATGA AATATATACA TATACGGGGA ATATCCTAAT TGCAGTTAAT CCATTCCAAA GGCTGCCTCA TATTTATGAA ACTGATATGA TGGAACAATA TAAGGGAGCT GCACTTGGAG AACTAAGTCC TCATGTTTTT GCAATTGGGG ATGCTGCATA CAGGGCAATG ATTAATGAAG GAAAAAACAA TTCGATTTTG GTAAGTGGAG AAAGTGGTGC TGGTAAAACC GAGACGACAA AGATGCTCAT GAGGTACCTT GCCTTTTTGG GAGGGAGGTC TGGTGTAGAA GGAAGGACAG TTGAACAGCA AGTCTTAGAG TCTAATCCAG TTCTCGAAGC ATTTGGCAAT GCAAAAACTT TACGGAACAA CAATTCAAGT CGTTTTGGTA AATTTGTTGA AATCCAATTT GACAAGAATG GAAGGATATC TGGGGCAGCT ATTAGGACTT ATCTGCTGGA GAGGTCCCGT GTTTGCCAAA TCTCAGATCC TGAAAGGAAT TACCATTGCT TTTATCTTCT TTGTGCTGCT CCGCCAGAGG ATATAAAGAA GTACAAGCTG GAAAACCCAC ATAAATTCCA TTATCTAAAT CAGTCAAGTT GTTATAAATT GGATGGTGTT GATGATGCTA AAGAATACCT TGAAACCAGA AGAGCCATGG ATGTAGTTGG AATCAGTAAC GAAGAACAGG AGGCAATCTT CAGGGTGGTT GCTGCAATTC TTCATCTTGG TAACATTGAC TTTGGAAAGG GGGAAGAGAT AGATTCTTCG GTCATCAAGG ATAAAGATTC CCGAAGTCAT CTTAATATGG CGGCAAAGCT ACTTATGTGT AACGCCCAGA GCCTAGAAGA TGCTCTTATT AGGCGTGTAA TGGTTACACC TGAAGAGATT ATCACGAGAA CTCTTGATCC CGATAATGCA ATTGCGAGTA GGGATACCCT GGCCAAGACA ATATATTCTC ACTTGTTTGA CTGGATTGTG AACAAAATTA ATACTTCCAT CGGGCAGGAC CCACGGTCAA AGTCGATTAT TGGAGTTCTG GATATCTATG GGTTTGAAAG TTTCAAATGC AATAGTTTTG AGCAATTCTG CATCAATTTC ACGAATGAAA AACTGCAACA GCATTTTAAT CAGCATGTCT TTAAGATGGA GCAGGAAGAG TACACCAAAG AAGAGATTGA TTGGAGTTAC ATAGAGTTTA TTGATAACCA AGATGTTCTT GATTTAATTG AAAAAAAACC AGGAGGAGTT ATTTCACTTC TAGATGAAGC CTGCATGTTT CCCAAGTCTA CACATGAAAC CTTCTCTCAA AAGCTGTTCC AGACGTTTAA AAATCACAAG AGATTTGCCA AACCGAAGCT CTCTCGCACT GATTTTACCA TATCACATTA TGCAGGAGAG GTTACTTATC AATCAAACCA TTTCATCGAT AAGAACAAAG ATTATATAGT TGCTGAACAT CAAGCACTAT TTACTGCATC TAATTGCAAG TTTGTGGCGG GTTTGTTCCA TGCGCTTCAT GAAGACTCAT CCAGGTCATC AAAATTTTCT TCCATTGGGT CACGGTTCAA GCAACAACTT CACTCGCTGA TGGAATCACT GAATGGTACA GAACCTCATT ACATCAGATG TATAAAGCCG AACAATGTTC TTAAACCTGG TATCTTTGAG AATTTCAACG TCATTCATCA ATTACGTTGT GGGGGTGTTC TTGAGGCCAT TAGGATCAGT TGCGCTGGCT ATCCTACCAG GCTTGCCTTC TATGACTTTC TCGACCGTTT TGGTCTCCTC GCTCCAGAAG TTTTGGAAGG AAATTATGAT GATAAAGTAG CTTGCCAAAT GATTCTTGAT AAGAAAGGTC TGAGGGACTA CCAGGTAGGA AAGACAAAGA TTTTCCTTCG AGCTGGTCAG ATGGCTGAAC TAGATGCGAG GAGAGCAGAG GTGCTTGGGA ATGCTGCCAG AGTCATTCAG AGGCAATTCC GCACATGTAT GGCCAGAAAG AATTACCGTT CTCTTCGCAA TGCTGCAATT GTTTTGCAAT CCTTCCTACG AGGCGAAATT GCCCGGACGG TACACAAAAA ACTGAGAATA GAAGCTGCAG CTCTAAGATT CCAGAAGAAT TTCCGCCGGT ACGTCGACAG GAAATCTTTT GTCACCACAA GATCATCTAC AATCGTGTTG CAGGCTGGCT TAAGGGCCAT GATTGCACGT AGTGAATTCA GACTAAAAAG GCAAACAAAA GCTGCCATTG TGCTTCAGGC TCATTGGCGT GGTCGCCAAG CATACTCGTA TTACACAAGA CTTCAGAAGA CGGCAATAGT CACACAATGT GCCTGGAGAT GCAGAGTTGC TAGAAGAGAG CTTAGAATGC TGAAAATGGC TGCAAGAGAA ACCGGTGCTC TTACAGATGC TAAGAATAAA TTGGAGAAGC GGGTAGAAGA GCTTACCTGG CGTTTGCAAT TGGAGAAGCG GTTAAGGACT GATCTTGAGG AGGCAAAGGT GCAAGAAGTT GCAAAGCTGC AAGAGGCATT GCATACCATG CGGTTACAAT TGAAAGAGAC TACTGCAATG GTCGTAAAGG AACAGGAGGC GGCTCGAGTA GCAATTGAAG ATGCATGTTC AGTTAATAAG GAACCTGTTG TTGTTGAAGA TACAGAGAAG ATCGATTCTT TGAGCAACGA AATTGACAGG CTAAAGGGAC TGTTGTCATC AGAAACACAT AAGGCAGATG AAGCAAAACA GGCTTATCTT AGTGCCTTGG TCCAAAATGA TGAATTAAGT AAGAAACTTG AAGAAGCTGG AAGAAAAATA GATCAGCTTC AAGATTCTGT TCAGAGATTC CAAGAAAAGG TCTTTAACTT GGAGTCGGAG AATAAAGTAC TCCGGCAACA AACTCTTACC ATCTCACCGA CTACTAGAGC TTTGGCCCTA AGACCAAAAA CTACCATAAT CCAGAGAACT CCCGAGAAGG ATACTTTCTC CAATGGAGAA ACAACACAAC TTCAGGAACC TGAAACTGAG GATAGGCCCC AAAAATCGCT TAATCAGAAA CAGCAGGAAA ATCAAGAGCT GTTACTAAAG TCTATTTCGG AAGATATAGG ATTTTCTGAT GGCAAGCCTG TTGCCGCCTG TCTGATATAC AAGTGTCTGA TACATTGGAG ATCTTTTGAA GTAGAAAGAA CCAGTATATT TAATCGTATA ATCGAGACAA TAGCATCTGC CATCGAGATG CAGGAAAACA GCGATGTACT ATGCTATTGG TTATCCAATT CCGCCACATT ATTAATGTTT CTTCAACGCA CTCTGAAAGC CGGTGCTACA GGAAGCATAA CTACTCCCAG ACGTCGGGGA ATGCCTACAT CTTTGTTTGG ACGGGTATCT CAGAGTTTCC GAGGTTCTCC ACAAAGTGCT GGATTCCCAT TTATGAGTGG AAGGGCGATT GGTGGTGGGC TAGACGAACT ACGTCAAGTT GAAGCTAAAT ATCCTGCTTT GCTTTTCAAA CAGCAACTCA CAGCTTTCCT AGAAAAGATA TATGGAATGA TCCGAGACAA GATGAAGAAA GAGATTTCCC CTCTGCTTGC TTCTTGCATT CAGGTTCCAA GGACACCACG GTCTGGTTTA GTAAAGGGAC GTTCTCAAAA TACACAAAAT AATGTTGTTG CTCCAAAACC GATAATTGCT CATTGGCAAA ATATTGTTAC TTGTCTAAAC GGCCACTTGA AGACCATGAG GGCCAATTAT GTGCCTTCGT TGCTAATTTC TAAAGTGTTC GGGCAGATAT TTTCATTTAT CAATGTTCAG CTGTTTAACA GCCTTCTTTT AAGACGTGAA TGCTGCTCAT TTAGCAATGG AGAGTATGTA AAAACAGGGC TTGCTGAGCT GGAAAAGTGG TGCCATGATG CAACGGAGGA GTTTGTTGGT TCGGCTTGGG ATGAACTAAA GCACATCAGA CAAGCTGTTG GTTTCTTGGT TATACATCAG AAACCTAAGA AGAGCTTGAA AGAGATAACT ACCGAACTTT GTCCGGTGCT TAGCATTCAG CAACTGTACA GGATCAGTAC AATGTATTGG GACGACAAAT ACGGTACACA TAGCGTATCT TCACAGGTGA TAGCAACCAT GCGGGCCGAG GTGTCAGATG TATCAAATAG CGCGATCAGC AATTCATTTT TACTAGACGA CGATTCGAGC ATCCCATTCT CGCTTGACGA TATCTCGAAA TCGATGCAAT ACGTAGAGGT TGCAGAGGTT GATCCTCCTC CGTTGATTCG CCAAAACTCC AACTTCATGT TCTTGTTGGA AAGGTCAGAT TGAAGTTTGA GACAGAAGTA ATC |
| Length | 4603 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7024703.. 7034220 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17580.1 |
| Description | myosin 1 |
| TAIR curator summary | Encodes a member of the type XI myosin protein family involved in organelle trafficking and overall plant development. |
| Alias | [ATMYA1][MYA1][XI-1][ARABIDOPSIS MYOSIN 1][myosin 1][MYOSIN XI 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg950858 | histone deacetylase 5 |
| 3.60555 |
Ahg919333 | Peptidase S24/S26A/S26B/S26C family protein |
| 3.87298 |
Ahg484134 | SNF2 domain-containing protein / helicase domain-containing protein |
| 5.65685 |
Ahg481220 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| 6 |
Ahg477051 | conserved peptide upstream open reading frame 56 |
| 10.8167 |
Ahg488386 | U-box domain-containing protein |
| 11.3137 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 17.6068 |
Ahg487631 | dentin sialophosphoprotein-related |
| 20.199 |
Ahg489836 | Sec1/munc18-like (SM) proteins superfamily |
| 24.4949 |
Ahg923455 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|