Detail



ID : Ahg490109

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490109|fgenesh2_kg.6__3243__AT4G04710.1
Sequence
ATGGGTTGCT GCGGAAGTAA ACCCCTAACA GCTTCTGATA TCGATGGAAA GCAAGAGACG ATTCTTGGGA AGCCATTGGA AGACATCAAG AAGCTTTATA GCTTCGAAGG CGAACTAGGC AAAGGTAACT TCGGGACAAC ATACTTGTGC AAAGAGAATT CAACAGGAAA GAGTTACGCT TGCAAATCCA TACTTAAGAG AACTCTAAGC AGTGAAGAAG AGAAAGAAGC TGTCAAGACA GAGATTCAAA TCATGGATCA TGTTTCAGGA GACCCTAACA TCGTACAGAT CAAAGGTTCT TACGAGGATA AGAATTCTAT ACACATTGTA ATGGAGTTTT GTGGTGGTGG TGAGTTATTC GACAAGATTG ATGCTTTGGT CAAGTCTCAT AGCTATTACT CTGAGAAAGA TGCTGCTGGA ATCTTTAGGT CGATTGTGAA TGCTGTGAAG ATTTGTCATT CTTTGGATGT TGTTCATCGT GATCTCAAGC CTGAGAACTT CTTGTTCTCT AGTAACGATG AGAATGCTAT GCTTAAAGCT ATCGATTTCG GGTGTTCTGT TTACATCAAA GAAGGGCAAA CTTTAGAGAG AATTGTTGGC AGTAAATACT ACATTGCTCC TGAAGTATTA GAGGAAAGCT ATGGGAAGGA AATCGACATT TGGAGTGCTG GTGTTATATT ATACATCTTA CTCAGCGGCC TTAAGCTAAA TACCTTGAGA TGTGTTCTTC TCTGTAATTG CGTCTACTCT TGTATTGTAG ATGCTGAGAT TAAGGAAGGC AGGCTTGATT TTGAGAGCCA TCCATGGCCT TTGATAACTT TTAAAGCGAA GCACCTTATC GGGAAGATGC TCACCAAAAA CCCGAAGGAA CGAATCTCTG CTGCAGATGT TCTTGAACAT CCTTGGATGA AGAGTGAAGC TCCAGATCAG CCTATTGATA ATGTTGTCTT ATCACGTATG AAGCAATTCC GAGCAATGAA CAAGCTTAAG AAGCTAGCTC TTAAGGTTAT CGCGGAGGGT CTATCAGAAG AGGAAATCAA AGGTCTTAAA ACCATGTTTG AGAATATGGA CACCGACAAT AGCGGGTCAA TCACTTATGA AGAACTCAAA ACCGGGCTGA ATAGACATGG CTCTAAACTC TCTGAAACTG AAGTTAGGCA ACTCATGGAA GCCGCTGATG TTGACGGGAA TGGAACAATA GACTACATAG AGTTTATCTC AGCAACGATG CATAGACACA GATTGGAACG AGATGAACAT TTGCACAAAG CATTCCAATA CTTTGATAAG GACAACAGCG GGTACATAAC GAGGGATGAA TTGGAGATAG CCATGAAGGA GCATGGTATG GGAGATGAAG CTAATGCCAA AGATATAATA TCAGAAGTCG ATAAAAATAA TGATGGAAAA ATAGACTATG AGGAATTTTG TACTATGATG AGAAATGGCA ACTTGCAGCC ACAAGGGAAA CTTCTTGGTG TCCATTGA 
Length1488
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21166348.. 21168652
Download Sequence
A.thaliana
AGI-codeAT4G04710.1
Descriptioncalcium-dependent protein kinase 22
TAIR curator summarymember of Calcium Dependent Protein Kinase
Alias[CPK22][calcium-dependent protein kinase 22]
Gene coexpression
MR
MR Locus Description
16.7929 Ahg921440
19.8997 Ahg338919 Protein kinase superfamily protein
20.5913 Ahg471265 Pentatricopeptide repeat (PPR) superfamily protein
21.5639 Ahg313733 VACUOLAR SORTING RECEPTOR 6
25.4951 Ahg939077 Phosphoglycerate mutase family protein
38.5746 Ahg917653 type one serine/threonine protein phosphatase 2
43.9318 Ahg472363 wall-associated kinase 2
44.7214 Ahg922740 Protein kinase family protein with leucine-rich repeat domain
48.7852 Ahg890225 Disease resistance protein (TIR-NBS-LRR class)
50.6458 Ahg470343 Cystatin/monellin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression