Detail



ID : Ahg486261

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486261|fgenesh2_kg.5__2253__AT3G58110.1
Sequence
AGTTTAGCTT TTCCGAGGAG AAAATCATCA GCCATGGCTT CTTCTCCGCC GTCAGATCCC ACCGATCGAG ATGCAGAAGC TCTTTCTGGG AACCCTAGTT TAATTGAGAA ACCGAGTTTA GTAGAGCAAG GAAGTATTTC ATTGGAGAAT GCGAATTCCG TCCCTAACAA AGCCCTAAAT CTAGAATCAA CACAGGACGA AGAAACACAG AATCTGCAGG ATCCGGAGGA ATCCGACGGT AGAGATCAGC AGTTAGAAGC TTCGATTGAG GAAAGTAGGA ACGAAGAGGA CGATATGGAC ACGACGCAAG CCGTTAGCTC TTCTTATTAC CGCCGTGGAG GTGGACCGAA GCGGAAGAAA GGGATTCAGA AGAAACGAAA GCAGCAAGAG AAGTCAAAAG AGAAGCTTGA GGTACTTCTG AAAACTTTGA AGCCCATTGC TTTCGTTCCA TGTAAAACCC TAGATTTTGC TCGGCATGAG AAGCTCTTGA AGACGTTAGG TCTGTGGGAT TTTGTGCATT TGGAGTTTGA TCAAAATATC CGTCAGGATC TAGTGGCGAA CCTTGTTGCG TATTATAATT CAGAGGGCCG ATGCAGCTAT GTTAATGGGG CTAGGATTAA CGTCAGCCGT GCTGATTTGG CTCGAGCGTT GAAGTTGCCT AAGAAGAAAG ACTTTGTTGT TACAGAGGAG GAGAGAGAAC TTCTGGAAAA CGATGAATCT GTTAGGTTTA TTGATGAGAT TCTTTCAACT TGGGTTCTAT TGCAAAGAGA TGATATGTGG ATTATGCCTG TAGAGATTGT TGAATGGACA AGGGATATAA AGCAAAAGCA TTTGGAAAAG TTAGACTGGC CTAAATTGCT CTGGTTCATG GTTGAGAAAG AACTGAAAGC GGAGCCTTTG CTTGGTGATT GTTTTTTTGC TTCTCATCTG CAGCTGTTGA TCAAAACACA GAAAGAAGAT TTACTAAAGG AAAAATGTAA AGCGGATGAT GAGGGGGATG ATGATGATGA CGACGACGAT GTAAAGGAGG TTGATTTTAT GGTAAAATCT CCGAAAGAAG ATTGTTTGGA GGTTAAGGAA GAAGATGCTG GTGCTGCAGA TTCAGGAAAG GATGATGGTG CCATCGACTC GAAAGAAGAC AAGTATGTGG AAGAACATAT GATCGAATTG AATCTCGGGC AAGAGACTGT GTCAGAAATG GTCTCTGGGG AAGAGCGAGG TCCTGTTGAG GGACAGCCAA TGGATGTTGA GGAAAATAAG AAAGAAGAGG ATGAAAGGTG GGCATGGAAT GAAGAGACCC ATGCTGGTTC TCATTTCCTT CGCCGTTGCA GTCTTAGTAG TGCTAGGGAG GGAGACGAAG ATAATCATAT TGAAGGATCC ATGGAAATGG GAGAAGATGA GCCAATTGAA GATGTCGGGG AAGAGGATGA GGAAGATACA GAAAAGCATG AAGAGGGGTT TCCTTTTTTT CCAAATGGCG ATTCCCTTCA GGGAGTTGGC CAAGAGAATC TCATGTTGGG GGATGCATCT CCGTTAGGTT ATAACTCTGG GTTACAAATT CATGGCAATT CAATTGGTGG TGATTTCCTT GCTTCTAGGG TTGACATGCA TATGACTATG GGTTCAGGTA GTTCTTCTCT GTTCAGGAAT GGCAATAACA AGAGGGAGAT TGAACACGAG AATCATATTT CTTATCATTC TCATAACCCC GGCAATAAGA GGTTGAGGAC CGAAGAACCT TCTTGGGATG AAAAACCACC CCCAGTTGAC ATGTGTTTGG ATCAGATTGT GTACTGGATT GAAAAAACTA GATTATCAAA TGCTGAAAAA GACCGAGAGC GTGAACAATC TGTTATGAAC CACCAGTATC TGATGAACGA ACTACAAAGC AAGGCAGCAA TGATTCAGGA ATTGGAAAGA ACCAAGTTTG AGGAGCAACA GAGAAAAGAT ATGATGATCT ATAAGCTTGA GAGTGAGCTT CGTATGATGA CAAGTGTAGT AGAGGGTTAT AGGAAGGCTT TGAAAGAAAC ACAAAAGGCA TCAAGAGAGC ACAGAAAACG TTGCCCTTTG CGTGATGAGA AACCGGTCTA CAAGGATGTC AAAGGTTCTG GAGGTTTAGT CCTGTGCACT ACTGAAATTG AAAAGCTGAG ATTGAAGCAA GAAGAGGAAG ATAGAATGAC ACGAACTCTA GTAGAAAGAC AGATTGAGGA CTTTGAAAGT CAGTGGCTTA ATAAATTTGA AGAACACATG GAGACAGTAG AATTGCTAAA CGAGAGATTC GTCGAGAATG AAAATGAAGT GAAGATACTG AGAGAAACAC TTTCGGAAAG CAAGAATCAT GAGACATCTG AAGTTGCTGC TGCTATAGAA GAAACTACAG AAGAAACTTG A 
Length2391
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17699521.. 17701903
Download Sequence
A.thaliana
AGI-codeAT3G58110.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.91608 Ahg476240 RNA polymerase II transcription elongation factor
11.6189 Ahg328082 LIM domain-containing protein
15.2971 Ahg495894 cyclic nucleotide gated channel 5
15.748 Ahg490265 oxidoreductase, 2OG-Fe(II) oxygenase family protein
15.8745 Ahg490855 calcium ATPase 2
16.8226 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
19.7484 Ahg489171 Tudor/PWWP/MBT domain-containing protein
24.1661 Ahg950590 smr (Small MutS Related) domain-containing protein
25.219 Ahg485358 casein kinase II, alpha chain 2
25.2982 Ahg482661 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression