Detail



ID : Ahg495435

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495435|fgenesh2_kg.8__1251__AT5G53588.1
Sequence
ACCTCCTCTA AAAAACAAAA TAAAAACTCT TCATGCTTAG CCTATCATGA GCAACATCCC TAGATCTCTC ACCGACTCAG ATCTTTCTCT CTTCCTTCTC ATTATATCTT CTGCTGTTGA TCCTTGGCCT TTTTCTATCA CTGTTTTTTA GCATCAACAA CCTCACCGGA AAATCTCTAA AAACCACCTT TTAACACTTC TCTTCCTCCT CGTCGATCGT TTTAACCAAT CTTTGTGTGT TTCTTGTTTG GTTTTTCGGT GAAAAAAGAT TCCTTCTTCT TAATGGGTTT TGAAGAAAAC CAAAAACAGA GTCCAAAACA GAGTCCGAAT CAGATCAAGC ATATGGTGTT CAACTTTCAC TTTCATGTTC CTCATCTCCA CATACTCCAT CATCATCACC ATCATCATCA TGATGTTCCT AAAGGCTGTG TAGCGATTAT GGTGGGACAT GAAGACGATG AAGAAGGTCT ACACAGATTT GTTGTTCCGT TGGTGTTCTT GAGTCATCCT TTGTTCTTGG ATCTCTTGAA AGAAGCTGAA AAAGAGTATG GATTCAAGCA CGATGGTCCG ATTACTATTC CTTGCTGTGT TGATGAGTTT AAGCATGTTC AAGAAATTAT CGACGAGGAG ACTCATCGCC GTCATAGTCA CGGTGGTCAC AGCCACAACA ACCATAACCA CCACAACAAC CATCTACGTT GTTTTTAAAG ATCTCTAATT CGATTTGTTG GTTTGCTCTG GTTTGGTTTG ACATGTAATT GGTTTGATTT GACAGATTTC TCTTTTGAGA TTGTTTAGTT TGCTTAATTT TTTTTGATGA TGATGATAAT GATGAAAAAA TCAAGAGAGC CATTAAATGT GAATGCTTTT TTTTTAAGAA TGTAATCGTG AGAAATAAGG GAATAATCAT ATTATTTGAT TTTTATTTTA TTGAAAGGAA TGTG 
Length944
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14894376.. 14895333
Download Sequence
A.thaliana
AGI-codeAT5G53588.1
Descriptionconserved peptide upstream open reading frame 50
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF50 represents a conserved upstream opening reading frame relative to major ORF AT5G53590.1
Alias[CPuORF50][conserved peptide upstream open reading frame 50]
Gene coexpression
MR
MR Locus Description
2 Ahg479829
6.7082 Ahg490265 oxidoreductase, 2OG-Fe(II) oxygenase family protein
8.60233 Ahg474126 Xanthine/uracil permease family protein
8.94427 Ahg321280
9.38083 Ahg936606 galacturonosyltransferase-like 10
12.3288 Ahg492064 Protein of unknown function (DUF1223)
13.2665 Ahg473458
13.4164 Ahg481115 Kinase interacting (KIP1-like) family protein
13.4907 Ahg488524 Chaperone DnaJ-domain superfamily protein
13.8564 Ahg483093
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression