Detail



ID : Ahg490276

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490276|fgenesh2_kg.6__3410__AT4G02820.1
Sequence
TAACTAAAAT GAATAAAAAC ATGTTGCTTC GCTCTGCTCG GCCAACCCTA GCCTCCATTT GCCGCCTTTT CTCCGCCGCC GCCGCGACGG TAGACACGAC GGCGGAAGCA GCGGTGAAGA CTCGCAGCGG AGGTGGAGGA GGAGCGACCA ATAGAAAAGA AACGGTAGTT GGAGGAAGAG ACACTCTAGG AGGGAGATTA TTAAGCCTTG TGTATACTAA ACGCAGCGCC GTTGTTACTA TCCGGAAATG GAAAGAAGAA GGCCATTCCG TTCGCAAATA CGAACTTAAT CGAATCGTTA GAGAGCTTCG TAAGATCAAA CGCTATAAAC ACGCTCTTGA GATATGTGAA TGGATGGTTC TACAGGAAGA TATAAAGTTG CAAGCTGGTG ATTATGCTGT GCATTTGGAT TTGATTTCTA AAATCCGTGG TTTAAACAGC GCGGAGAAGT TTTTCGAAGA TATGCCGGAT CAAATGCGAG GTCATGCTGC TTGTACATCA CTTCTACATA GCTATGTGCA GAACAAGTTG TCTGACAAAG CTGAGGCTTT GTTTGAGAAA ATGGGTGAAT GTGGTTTCTT GAAGTCTTGT TTGCCTTACA ATCATATGCT ATCGATGTTT ATATCGAAAG GCCAGTTTGA GAAAGTCTCG GTGTTGATTA AGGAATTGAA GATGAAAACA TCGCCTGATA TTGTTACTTA TAATCTATGG CTGACTGCGT TTGCTTCGGG AAACGATGTT GAAGGTGCAG AAAAAGTTTA TCTTAAGGCG AAGGAAGCTA AGCTGAATCC GGACTGGGTG ACTTATAGCG TGCTAACGAA TTTGTATGCT AAGACTGATA ATCTCGAAAA GGCAAAACTT GCTTTGAAGG AGATGGAGAA GTTAGTTTCT AAGAAAAACC GGGTTGCTTA TGCTTCTCTC ATTAGTCTGC ACGCGAACTT GGGCGACAAA GATGGAGTCA ACTTAACTTG GAAGAAGGTT AAGTCGTCTT TCAAGAAAAT GAATGATGCG GAATACCTTA GTATGATATC TGCAGTGGTG AAGCTTGGTG AATTCGAACA AGCCAAAGGT TTGTATGACG AATGGGAATC TGTTTCTGGA ACAGGAGATG CTAGAATCCC GAATCTAATC CTTGCCGAGT ACATGAACAG AGACGAGATT CGTCTAGGAG AGAAGTTCTA CAAACGAATT GTGGAGAAAG GGATAAACCC TAGCTATTCT ACATGGGAAA TTCTCACATG GGCTTATTTG AAGCGTAAAG ATTTGGATAA AGTTTTGGAT TGTTTTGAGA AAGCCATTGA TTCTGTGAAG AAATGGACTG TGAATGTAAG ATTGGTTAAA GCAGTGTCCA AGGAACTCGA GGAACAAGGG AATGTTAAAG GAGCAGAGAA GCTAATGATT CTACTACAAA AGGCTGGTCA TGTGAACACT CAGCTCTACA ATTCCTTATT ACGTACTTAC GCTAAAGCTG GTGAAATGGC ACTCATAGTT GAAGAACGAA TGGCAAAGGA TAATGTAGAG TTAGATGAAG AGACTAAGGA GCTTATAAGA CTAACCAGTC GAATGCGTGT GACTGAAATC TCGTCCACCA TTTCTTAGCA TGAAAGCTGC AGAGTTAGTT TCGGACTGCA ACTTCCACAA ACCGAAGAAT ACAGAAACCG TTCTCTAAAG TCTGTACCAA TGGAGATACT TGTCTTGAAG CAGTAACATT CGACTTGCTC TGACATTTAG AGCTTGAGCA GAGTGTCCAA AGCTGCAGAG GAATGAAGTT GCTTTTTTTT CTTTTCAGAA TTTAGTATGA TTAAAGTCTG TGCCAATTTT ATATATTTGG TTCTCTATAT GATGATGTCA AATGATCTTT GAGAGGTTGA CTAACTGAAA AACCTACTTC GACTCTTCTT GTTGGGTAGT TATGACTTGT GTAAAGCTTA TGTAAGCTTT CAAAGACTTG TGTCCAAAGT GGATTTGTTC ACCTC 
Length1975
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22002740.. 22004949
Download Sequence
A.thaliana
AGI-codeAT4G02820.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg313692 acyl-activating enzyme 14
7.2111 Ahg940824
8 Ahg922958
8.94427 Ahg474241 transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases
10.8167 Ahg491670 Tetratricopeptide repeat (TPR)-like superfamily protein
10.9545 Ahg470941 Presenilin-1
17.0294 Ahg493637 phytochrome C
24.1868 Ahg478110 homolog of yeast ADA2 2A
31.5595 Ahg359673 BRCT domain-containing DNA repair protein
32.1714 Ahg473588
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression