Detail


ID : Ahg491670

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491670|fgenesh2_kg.7__1103__AT4G30825.1
Sequence
ATGGGTTCCT TAAGATTGTC CATTCCATTG GACCCATTCG ACTCAAAAAG GTTTCACTTT TCTGCGAACC CATTTCAGTT TCCTGATCAA GTTCCAATTT TTTCAGTTAG CACTAGTGTT CCCGCCACTA GAATCGGTTC TCTGATTAGG GTCAAGAAAA TTCGAGTATC TCGTCTCGAT ATTGAAGCAA AGGAGGCCGA GAATGCTATT GATTCTGATT CCGTTAATGT GGAGAGAAGC TCGAATTCTA AATTTCAAGG TAGAGATACT TTCACGAGTG GTAATCAGAG AGGGACAAAG AAAGATGTGG CTCGGAAGTT CAGTTTCCGA AGAGAAAGCA ATGATCTTGA GCTTGAGAAT TTGTTTGTGA ACAATGGGGA AATAGATGTT AATTACTCTG CTATTAAACC TGGTTTGAGT TTCGAGCATT GCAATGGTAT ATTGAAACGG CTTGAGAGTT GCAGTGACAC TAATGCCATC AAGTTCTTTG ATTGGATGAG ATGTAAAGGA AAATTGGAAG GTAACTTTGG TGCTTACAGT TTGATTCTTA GAGTTTTAGG AAGGAGGGAA GAATGGAACC GAGCAGAGGA TCTGATCGAA GAGTTGTGTG GATTTCAGGG CTTTCAGCAG AGTTTTCAGG TCTTCAACAC GGTTATATAC GCTTGTACTA AAAAGGGGAA TGTGAAGTTA GGTTCAAAGT GGTTTCAGAT GATGTTGGAG CTCGGTGTTA GACCAAATGT GGCTACAATA GGTATGCTAA TGGATCTTTA CCAGAAGAAC TGGAATGTTG ATGAAGCGGA ATTCGCATTT TCTCATATGA GAAAATTTGG GATTGTGTGT GAATCTGCTT ACTCCTCGAT GATAACGATT TACACACGCT TGAGATTATA TGATAAAGCA GAGGAAGTTA TACACTTGAT GAAACAAGAT AGAGTGAGGC TGAAGTTAGA GAATTGGTTA GTGATGCTTA ATGCTTATAG TCAGCAAGGC AAAATGGAGC AAGCTGAATC TGTTTTGATC GCTATGGAAG CCGAGGGTTT TGCTCCGAAT ATTATTGCAT ACAATACTCT GATAACTGGT TATGGTAAGG TTTCTAAAAT GGAGGCTGCA AAGAGTTTAT TCCACCGCCT CTATGATATT GGGCTGGAAC CAGATGAAAC AAGTTACAGG TCGATGATTG AAGGTTGGGG CCGTGCTGAC AATTACGAGG AGGCAAAACA TTACTCTCAA GAGCTGAAGC GGTGTGGATA TAAACCCAAT TCATCCAATC TTTTTACTTT GATCAATTTG CAAGCTAAAT ATGGAGACAG AGATGGTGCT ATTAAGACGA TCGAAGATAT GACTAGTATC GGATGCCAAT ACCCCTCGAT CCTTGGCATC ATTCTGCAGG CTTATGAGAA GGTGGGGAAG ATCGATGCGG TGCCTTATGT TCTCAAAGGT TCTTTTCATA ATCATATCCG TTTAAACCAG ACTTCTTTCT CGATTCTAGT GATGGCATAT ATCAAACATG GTATGCTTGA TGATTGCTTG GCGTTGTTGC GAGAAAAAAA GTGGAGAGAC TCAGCATTTG AGTCCCACTT GTATCATCTG TTGATTTGCT CTTGCAAAGA ATCTGGGCAA CTTACTGATG CTGTGAAATT ATACAACCAT ACAATGGAAT CAGATGAAGA GATAAATCTG CATATTACGT CCACAATGAT TGACATTTAT ACTGTGATGG GTGAATTTGG TGAAGCAGAG AAGCTTTATT TAAATTTGAA ATCTTCTGGA GTTGTGTTGG ACAGGATTGG GTTCAGCATC GTGGTGCGGA TGTACGTTAA AGCCGGATCC TTGGAAGAAG CCTGTTCTGT CCTAGAAATC ATGGATGAGC AGAAAGACAT TGTTCCGGAT GTGTACTTGT TTCGCGATAT GCTTCGGATA TATCAGAAGT GTGACCTTCA GGATAAACTC CAGCATTTGT ACTACAGGAT TCGAAAGAGC GGGATCCATT GGGATCAGGA GATGTACAAT TGTGTTATAA ACTGTTGTGC GCGTGCTCTT CCGCTTGATG AACTCTCAAG AACCTTTGAG GAAATGATTC GATATGGATT TACTCCTAAT ACAGTCACAT TCAATGTCCT CCTTGATGTT TATGGTAAAG CGAAGCTCTT CAAAAAGGTT AACGAGCTTT TCTTGTTGGC GAAAAGACAC GGAGTTGTGG ATGTAATATC CTACAACACC ATTATAGCTG CCTATGGAAA GAACAAGGAC TTTACAAACA TGTCATCAGC GATTAAGAAT ATGCAATTTG ACGGGTTTTC TGTGTCACTT GAAGCTTATA ATACTTTGCT GGATGCATAT GGGAAAGATA AACAGATGGA GAAATTCAGA AGCATCTTGA AGAGAATGAA GAAGTCTACA AGTGGACCGG ATCATTATAC ATATAACATC ATGATCAATA TTTATGGTGA GCAAGGATGG ATCGATGAAG TCGCTGGTGT TCTGAAAGAA TTGAAAGAAT CGGGACTTGG TCCTGACTTG TGTAGCTATA ACACGCTGAT AAAGGCGTAT GGTATAGGTG GAATGGTTGA AGAAGCTGTT GGGTTGGTGA AGGAGATGAG GGGAAAGAAC ATAACACCTG ATAAAGTAAC TTACACCAAT CTGGTCACAG CTTTGCGCAG GAATGATGAA TTTCTTGAGG CTATTAAATG GTCTTTGTGG ATGAAACAAA TGGGTATATA G
Length2721
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4329340.. 4332060
Download Sequence
A.thaliana
AGI-codeAT4G30825.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg904695 evolutionarily conserved C-terminal region 6
8.12404 Ahg950958 MEI2-like protein 1
8.48528 Ahg927732 Pentatricopeptide repeat (PPR) superfamily protein
10.3923 Ahg897654
10.7703 Ahg490608 Transducin/WD40 repeat-like superfamily protein
10.8167 Ahg490276 Pentatricopeptide repeat (PPR) superfamily protein
10.9545 Ahg950617
18.8944 Ahg482978 ACT domain-containing protein
26.5518 Ahg480210 OBP3-responsive gene 4
29.5635 Ahg932732 embryo defective 2410
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression