Detail



ID : Ahg490415

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490415|fgenesh2_kg.6__3549__AT4G01610.1
Sequence
AAGAAATGTC TCTGTCATTC TGCAGTAGAT AAGCCACTCT CTCTCTCTCT GAAGATTCAT TCCCCCACCA CTGAGGTTTA ACTTATACAA ATAGATCTTT TGGTTTTTGA TTCATCGAAG AAGCAAACTC TGTTTTCATG GCTGATTACA ATACCAAACT CTGTTTGGCC TCTGTTTTCT TGCTCTTAGG GCTTCTCTTG GCTTTTGACT TGAAGGGTAT AGCAGCAGAA AATCTTACCA AACAGAAACT GAACTCGAAG ATACTTCAGG ATGAGATTGT GAAGAAAGTC AACCAAAATC CAAACGCTGG ATGGAAAGCT GCTATAAATG ATCGATTTTC AAACGCCACT GTTGCAGAGT TTAAGCGCCT TCTCGGTGTT AAACCAACAC CGAAGAAGCA TTTCTTAGGT GTTCCTGTTG TAAGCCATGA TCCATCTTTG AAGCTACCTA AAGCTTTTGA TGCTAGAACT GCTTGGCCAC AATGCACTAG TATTGGAAAG ATCTTAGATC AGGGACATTG TGGTTCTTGC TGGGCATTTG GTGCTGTTGA ATCACTATCT GATAGATTCT GTATCCAATT TGGCATGAAC ATTTCTCTAT CAGTTAATGA TCTTCTAGCT TGTTGCGGAT TCCGTTGTGG TGATGGTTGT GACGGTGGCT ACCCAATTGC TGCTTGGCAA TACTTTTCGT ATAGCGGTGT TGTAACCGAA GAGTGTGATC CATACTTTGA TAATACCGGA TGCTCTCACC CGGGTTGTGA ACCGGCATAT CCTACACCGA GATGTTTGAG GAAATGCGTT AGCGACAACA AACTATGGAG CGAGTCGAAG CATTACAGTG TCAGTACATA CACTGTTAAT TCTAGTCCAC AAGATATCAT GGCAGAGGTT TATAAGAATG GACCTGTTGA AGTCTCTTTT ACTGTTTATG AGGATTTTGC TCATTACAAA TCTGGAGTCT ATAAGCACAT AACAGGATCT AACATTGGAG GTCATGCTGT TAAACTTATT GGTTGGGGAA CTAGCAACGA AGGCGAAGAT TATTGGTTGA TGGCAAATCA ATGGAACAGA GGCTGGGGTG ATGATGGTTA TTTCATGATA AGGAGAGGAA CTAATGAATG TGGAATTGAA GATGAACCAG TGGCTGGTTT GCCTTCAAGC AGGAATGTGT TTAAGGTTGA TACCGGTTCG AATGATCTTC CGGTTGCGTC GGTTTAAGAT CAAAGATGGA AATGTTGCAT CGGTTTAATA TCGAAGATGA AAAGTTGTTT GTAAGATATA TGTTATGGTT GTTGTTTGCA GTAAAAGAAT CCGGTGACTG GAAATTGTTT TCTGGTTGGC TGTGAAAATG TTATACAAAT AAGTACTT 
Length1368
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22713068.. 22715429
Download Sequence
A.thaliana
AGI-codeAT4G01610.1
DescriptionCysteine proteinases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.9583 Ahg490488 TRAF-like family protein
20 Ahg929332 metallothionein 3
20.8567 Ahg477244 Tetratricopeptide repeat (TPR)-like superfamily protein
25.8457 Ahg476684 bifunctional nuclease in basal defense response 1
31.3688 Ahg490677 Papain family cysteine protease
35.9166 Ahg323209 Cysteine proteinases superfamily protein
38.8072 Ahg337666 cellulose synthase like E1
40.8901 Ahg931018
42.4264 Ahg493510 Rapid alkalinization factor (RALF) family protein
43.0581 Ahg492324 Fe superoxide dismutase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression