Detail



ID : Ahg490612

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490612|fgenesh2_kg.7__45__AT4G38510.2
Sequence
CCTCTTCACA GATCTTTGGA TTAAGAAGAA AGTGATCTAA AATGGGTGCT GCTGAAAACA ACCTTGAAAT GGAGGAGGGT ACCCTGGAGA TCGGCATGGA GTATAGAACT GTCTCTGGTG TTGCCGGCCC TCTCGTCATC CTTGAAAAAG TCAAGGGCCC TAAATACCAA GAAATTGTCA ATATCCGTCT TGGGGATGGA ACTACCCGAC GTGGTCAAGT TCTCGAAGTT GATGGAGAGA AAGCTGTTGT TCAGGTATTT GAGGGAACAT CTGGAATTGA CAACAAGTAC ACAACTGTGC AATTTACAGG AGAGGTTTTG AAAACTCCTG TTTCTTTGGA TATGCTTGGT CGCATCTTCA ATGGTTCAGG GAAGCCCATT GACAATGGTC CACCTATATT GCCCGAGGCA TACTTGGATA TTTCTGGAAG TTCTATCAAT CCCAGTGAGA GAACCTATCC TGAAGAGATG ATTCAGACGG GGATATCCAC CATTGATGTC ATGAACTCTA TCGCCAGAGG ACAGAAGATT CCCCTCTTTT CTGCTGCAGG TCTTCCCCAC AATGAAATTG CTGCTCAGAT TTGCCGTCAG GCTGGTTTGG TTAAGCGTTT AGAGAAGTCG GATAATCTCC TCGAGCACCA AGAGGATGAT AACTTCGCCA TTGTGTTCGC AGCAATGGGT GTGAACATGG AGACTGCGCA ATTTTTTAAA CGTGATTTCG AGGAGAATGG GTCGATGGAG AGAGTGACTC TTTTCCTTAA CTTGGCAAGT CTCGCAGCAA ACGACCCCAC TATTGAGCGT ATCATCACTC CTCGTATTGC TCTTACAACG GCTGAGTACT TGGCATATGA ATGTGGCAAG CATGTCCTTG TCATTCTCAC AGACATGAGT TCCTACGCTG ATGCTCTTCG TGAGGTCTCT GCTGCCCGTG AAGAAGTGCC TGGAAGGCGT GGTTACCCAG GTTACATGTA CACCGACTTG GCTACTATAT ACGAGAGAGC GGGGCGAATT GAAGGAAGGA AAGGTTCCAT CACTCAAATT CCCATTTTAA CCATGCCAAA CGATGATATC ACACATCCCA CACCGGATCT GACAGGATAC ATTACAGAGG GCCAAATCTA TATTGACCGA CAACTTCACA ATAGACAGAT ATACCCTCCG ATCAATGTCT TGCCATCTCT GTCTCGTCTT ATGAAGAGTG CCATTGGTGA GGGTATGACT CGCAGGGACC ACTCTGATGT TTCTAATCAA TTGTATGCCA ACTACGCTAT TGGAAAGGAC GTCCAGGCCA TGAAAGCCGT GGTTGGAGAA GAAGCTCTTT CTTCCGAGGA TCTGCTATAT CTGGAGTTCT TGGACAAGTT CGAGAGGAAG TTTGTGGCTC AGGGAGCTTA CGATACCCGG AATATCTTCC AGTCACTCGA CCTGGCATGG ACACTCCTGC GAATCTTCCC CCGTGAGTTG CTTCACCGTA TACCGGCGAA AACCCTTGAT CAGTTTTACA GCCGCGACAC CACCAACTGA AAGACATAGT TTCTATGGCG TTGGTGTGAT GATATGTCCA AATGCATCTT TGTTTTTTAC TTCTGCGGTT GGTTCGCACC TCTGTGTCTT CCGTCCCAAT AAATGGTGTT TGTTCCCAAT CGCTAGACCC TTTATTATTG TCTTCGAAAC TGAGCAAGAG AGGATGGTTA TTCTTTTTGA AAGAGAGATT GAGATTCTTG TGTAATTTAT GAGATTTACC AAATTACTGG TTCAGAACAA TATACATTTG TTTGTCTTAT TACAGATCAC GAATATCAAT GCAGCTTTTT TTTTTTTAAT AACAATTTGG GTTTT 
Length1835
Protein Sequence
Protein Residue
Map Locationscaffold_7: 124284.. 128602
Download Sequence
A.thaliana
AGI-codeAT4G38510.5
DescriptionATPase, V1 complex, subunit B protein
TAIR curator summary
Alias[AtVAB2][VAB2][V-ATPase B subunit 2]
Gene coexpression
MR
MR Locus Description
13.2665 Ahg920320 Ribosomal protein L16p/L10e family protein
13.8564 Ahg478800 Dihydrolipoamide acetyltransferase, long form protein
16.7332 Ahg479524 T-complex protein 1 alpha subunit
26.1916 Ahg478235 Ribosomal protein L10 family protein
30.0666 Ahg486730 ubiquitin 5
31.289 Ahg944059 cytochrome c oxidase-related
34.8138 Ahg489891 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
35.3695 Ahg496177 GTP binding Elongation factor Tu family protein
40.2492 Ahg479804 Pyruvate kinase family protein
40.2492 Ahg489037 YGGT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression