Detail



ID : Ahg490626

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490626|fgenesh2_kg.7__59__AT4G38620.1
Sequence
ATCATCTAGA AGCAATTTTG TATATAACTA TATATATATG TGTATATCCA TGTGTAGCTT TAAGTCAAAA CCCTATATAA ACTATACACC AAAGCTTTGA ACCTTCAACC AAACCCAAAA TCCAAGTGCC CCACCAAATG CTTCAATCCT CTTCCACTAC ACAAGAAAAC AACTTAATCC CTTTATACCC TTTTAGCCAA AACCCTCACT AAAAGCCAAT CCATATATAA TAACAAGAAG AATTGATCAT ACTGCCTATA TATAAGATTT TGTATCAATT CACATCAAGA AATAAGATCT AAACCACAAG AAAGAAAAGA AAAAAAAAAA AAAAAAAAGT ATGGGAAGGT CACCGTGTTG TGAGAAAGCT CACACAAACA AAGGAGCATG GACGAAAGAA GAGGACGAGA GGCTCATAGC TTACATTAAA GCTCATGGAG AAGGCTGCTG GAGATCTCTC CCCAAAGCCG CCGGACTTCT TCGGTGTGGC AAAAGCTGCC GTCTCCGGTG GATCAACTAT CTCCGGCCTG ACCTTAAGCG TGGAAACTTC ACCGAGGAAG AAGACGAGCT CATCATCAAG CTCCATAGCC TTCTTGGCAA CAAATGGTCG CTTATTGCCG GGAGATTACC GGGAAGAACA GATAACGAGA TTAAGAATTA CTGGAACACA CATATACGAA GAAAGCTTAT AAACAGAGGG ATTGATCCAA CGACTCATAG ACCAATCCAA GAATCATCAG CTTCTCAAGA TTCTAAGCCT ACACAACTAG AACCAGTTAC GAGTAACACC ATTAATATCT CCTTCACTTC TGCTCCAAAG GTCGAAACGT TCCATGAGAG TATAAGTTTT CCAGAGAAAA TATCAATGCT TACGTTCAAA GAGGAAAAAG ACGAGTGCCC AGTTGAAGAA AAGTTCCCAG ATTTGAATCT TGAGCTCAGA ATCAGTCTTC CTGATGATGT CGATCGTCGT CAAGGCTTGG TGGGACACGG AAAGTCAACA ACGCCACGTT GTTTCAAGTG CAGCTTAGGG ATGATAAACG GCATGGAGTG CAGATGCGGA AGAATGAGAT GCGATGTAGT TGGAGGTAGC AGCAAGGGGA GTGACTTGAG CAAGGGATTT GATTTTTTAG GGTTGGCAAA GAAAGAGACC ACTTCTCTTT TGGGGTTTCG AAGCTTGGAG ATGAAATAAT TAATATTGTC AAATTTAGGC GTAACTGTAC AAAACTTTTG CCTAGATAAT TTCAAAGTAA ATCTTCTTCA ACTTGTATGA GAAATTTAAC TGTTGA 
Length1286
Protein Sequence
Protein Residue
Map Locationscaffold_7: 173245.. 174719
Download Sequence
A.thaliana
AGI-codeAT4G38620.1
Descriptionmyb domain protein 4
TAIR curator summaryEncodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.
Alias[ATMYB4][MYB4][myb domain protein 4]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg947531
13.4164 Ahg495371 alpha/beta-Hydrolases superfamily protein
15.0997 Ahg492240 Calmodulin-binding protein
16.6733 Ahg932268 alpha/beta-Hydrolases superfamily protein
24.2899 Ahg491705 NAD(P)-binding Rossmann-fold superfamily protein
24.454 Ahg921770 squamosa promoter-like 11
27.7128 Ahg486830 Protein kinase superfamily protein
29 Ahg494989 hydroxyproline-rich glycoprotein family protein
36.2077 Ahg470092 ARM repeat superfamily protein
52.2303 Ahg928882 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression