Detail



ID : Ahg490685

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490685|fgenesh2_kg.7__118__AT4G39140.3
Sequence
TCGCCCTCTC TCTCTCTCTC TAACGAGAAG GAACAAAGCA GTGCTCGTTT CCTTTTTCTC CCTTTCTCAC TCTAACAGAC CCATCGCTCT CTCTCCGTGA AACCGTCATC TTCCTCTTCT CCGGCGACGT TTTGAGACTT CTGGGAGCAG CTAGAAAGGG ATTGTTGTGC TTATAAGCAC TGTCTTTGCG TAGTGCTTAG TAGTTGCGAC TTGCGAGTTA TGGGGAATGC ATGTTGTGTT GCTGCTCGAG ACAAAATGGT GGTGCCTAAT TCATCAGCTG GTGAGAATTT GCAGAGGAGC AATGTCAGGC ATTCTCCGAC TTGGAGTTTC CGTTGGGATA ATAGAGGACG TGTAGCTGGT GAAGAAACCT CTCTCAGTTG GTTATCTGAT GGGATTAGTC GGAACGATGG CTCTGAGATC AAATTTGAAT CTGCTTTTGT ATCATCTGAA GGTTCCCCTT TGGACAGTTT TCGGACACAG GCATTGCAGA AATCCCCTGC CTCAGATCTA TCTTTTCCAA GAAATTCTTC CATGAATACA GTCTTCGAAC AGAAAGAAAA TGTTTCAACA GAGTCTGCAG CACCATCATA TCCATCTCCT GCAAAATTGT CTCTTTCACT GGCTTCACAA CCATCATCTT TCCCTACATC ACCACTTTCG TCCCAAAGCT ACTTGCACCC TGCAAGTTCA TCGACACTTA AACTGACACA TCGCCCTCGT CTATCAAAGC AAGTCTCAGA TGGTCAAATC TATGGTCCGA ACTCACTAAG TAGAAACTCA GCAACTGAAG AGAGGCAGGG AACTCCTTTG AGATATGATT CTTCTCAGTC TGGACCATCT GAAGGTTGGT CACTGCAAGC CTTTTCTGAA ATGATGTCAT CTTCTCGCAG CAACGAACCT TTGTCTTATG ATAATGATTG CTTTGGGCTT CAACGTGACA AGATAGACCA TCATGGCAAC CGAATGTCCA AGCATCAGCA GCAAACTTGC GGTGCTTGCT CTAGACCCTT GTCAGAGAAA TCCTTGTGGA GCAGCCAAAA GATCTTCATG ACCAACGAGC TCTCTGTGTC TGCAATTCTA GCTTGTGGGC ATGTCTATCA TGGGGAGTGT TTAGAGCAGA TGACGCCGGA AATCGATAAA TTCGACCCTT CATGCCCAAT CTGTACAATG GGTGAGAAGA AAACGGCGAA GCTGTCAGAG AAAGCGTTGA AAGTAGAGAT GGATTTGAAA GCTCGACACA ACAAACGACT CAGAAACCGA GTTTTGGACA GTGACTTTGA TTGCGATGAT TTTGTAATGT TTGATCACAG CCACAGGACA GCAGCAGCAA CAGCAAGCAA GAGCCCTAAA CTGCTCTCGA GTTCGAGTGC CAAAAGCTAT TCTGCAAAGC CTTTCTTGGC TCGACACTTC TCTTTCGGGT CCAGAAGTAA TTATAAATCC CCTAAAGAGA ATCTTCCAGT GAAAAAGAAA GGCTTCTTCT GGACCAAATC CAGCAAAATA TGAACTTCTT TCGCGGTGCT CTGTACTTTG ACTGCTGTCT GAAGCATAGA AGTCGACACA CACACACACA CCGGGACACG GTACCATTCA ATTAAAAGCA GGCTATTTGT TGTTACACAC TTGCTCAACA AATTTTTTGT TTTAATGAAT ACTTAATTTT CACACATGTA AAGTTACAAA TTTAGATTAC AAGGTTGGGG A 
Length1701
Protein Sequence
Protein Residue
Map Locationscaffold_7: 387774.. 390505
Download Sequence
A.thaliana
AGI-codeAT4G39140.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.96 Ahg475301 pre-mRNA processing ribonucleoprotein binding region-containing protein
29.1376 Ahg887884 glutamate receptor 2.7
29.6985 Ahg942029 Protein of unknown function (DUF1162)
31.9374 Ahg931380 Protein of unknown function (DUF810)
40.3237 Ahg937652 phosphate transporter 3;2
48.1248 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
49.96 Ahg492386 ubiquitin-specific protease 16
50.6261 Ahg910527 Transmembrane amino acid transporter family protein
52.6498 Ahg478310 D111/G-patch domain-containing protein
54.7449 Ahg478986 Regulator of chromosome condensation (RCC1) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression