| Annotation |
|---|
| Description | jgi|Araly1|492386|fgenesh2_kg.7__1819__AT4G24560.1 |
| Sequence |
AAAAGCAAAG CGTCTTGGTT TAGAAAAGTA ATATCCTCCT CTCCTATTTT CTTCCTCCTT GTACCGAAGA ATCTCTCCAC TCTTGCCCTC TTTCGAAACC CTAAACCAGA AGCACCACCA GAATTTTTCA ACTTTTTTCA GAGAACAATA GAAAACCCAA CTTGTGCTCT CGAGGGTTTT CTTTATTCCT CTCATCTTTG GATTTTCGTG GGTCATCATT TTGGAAGCTT ACCCACCAGC GAAACGATCT CTGGGTTCTC TCTCTGCATG TGCTAAATCG CCGGACTGAT CCTCACTGTC ACCTCTGTTC CCGGCTAATT CGCCGGTGAA ATCTATGGTT GGTGGTCAGA TTTATTTCCA ATTGTTTGTG CATCTGGTGG AGGATAAATG CTCCTTGTTT TGGATCTAGG GATTTCTAGT CTAGTCCTTG TGATCTCTCT TGTTCTGCCT CTGATCGGCC TCTTTGTTCG TCACAAATGG AGGGTCGCTG CCCAAAGGAG GGAAGAGATT AGGAGACTTC TTATTCATGC GTCTCAAGAG GCTGCTAGGG CTGAGCTAGA GGCCTCTGTT GAGTTCTCTT CTGTGGCCAT CTCTAATGTC TTCCATTGTC CTGTGTGTTA TTGTCTTGCC ACGACTCGAT GCTCTCGCTG CAAATCGGTT CGATATTGTT CGGGGAAATG TCAAATCATT CACTGGCGGC AAGGTCACAA AGATGAATGT CGTCCTGCTT CCATTGTATA TGATAGTGAA GATGAGAAAA GTGATTCTGA TTTGAGATCC AGAGAAGAAA ATGAACGGAA TACTCATGAG GAAACTTTAC TGCTGGATCC AGAACCAGTT ACTATACCAA TTGGGGAAAC AATATTATCT GATCCTGCCA GATCTCCTGA AGATGGGAAT GGAGATATTG CAGATAACAA AGATGACCTC ATAGATAAGG AGGAAGCTGT TTCTGTTGCT GAAACATCTG GATCCTCGTT TTCTGGCTTC TCCTCCTCCC CCCGTAATGA CTCTGGTGAT GAGATTTCTC TTTGTGAGAG CTTTAGTTCA TCTGAATCCG AGAGATCAGA GTCCCTACTT GATGCTCATG TCTCTGTAGA GCCAGAAGAC ACCTGTTTCA GCACCATCGA TGATGCTCCA TCCAAACTGT TGTCTCCTAA ATTTGTGCAC TTGGTTGAAT CTGTAGATAA CCTCGCTAAT CTGCCTAAAT TAAGTGTACA TAAGCCTGGG GGTGATGCTG GGCAGAACCA GAGCCAATCA AGGAGCTTAC ACTCATTAGT TACGGATAGG CATCCAGTAT CCACTGACCC ATCTCCTCTA AAGTCATCTG ATTTTTGGGG TACGGCTCTT GGATCAGCAG AACGTGTAAG TGAGTCTTGT GATAAATCTA AATCTGGTAG ACCTGGTAAC TCCTCTCTGC ATTTCTCCTT TGGCTCCTCT AGAGACACCT CAGCTGCTAA AGTTTCTGAG CACAAAAGGA GCATTTTAAA AGAAGCTCCT AGTGCTGCAT TAGGGACTGG TAATAATCTA AAAGAAAGAA ATGCTAAAAT ATTTGATGAA GCTGAAATTG CATTACCAAC TTCCTCTTCT ACTGATGCGC CGAGTCCTTT GGACACTTCT AATTTGCCCC ATGTGACCCT TCAGAAGTTA AAGAGCGCCA GTAGTGAAAA TGGCTGTATG TTGGCCCCTT TGAAGGTTGG GGAAGTCCAA CTTTTGGCAT CCAAGGCCTC GAATACCAAG GAGTGTGCTG ATCTTATGAA ACATTCTCCT CTAGGTGCAA AATCTGTAAG AGTTCTTGAT CATCAGAAAC AGAATGGTGC TGCCGTTCAC CGTATAAGTT CTCTACATGG AAGAAGTGGT TTGAAGGCAT CAGTACTGAA AGTTGTAGAC CAGTGGACTA GACCGAAGTC GGAAAATGAG ATGGCAGGAA GACATGGTCA TAAGGGGCTC TTTCCATATG AAGTCTTTGC TAAGCTGTAT ACAAGTAAAA TTGAGTTCCA GCCTTGTGGC CTCATCAACG TTGGCAATAG CTGCTTTGCT AATGTTGTCT TCCAATGCCT GATGTTCACT CCTCCTCTGA CGACATACTT CCTCCAGCAA CTTCATTCTA GAGCATGTAC AAAAAAAGAA CAGTGCTTCA CCTGTGGATT TGAGAAGCTG GTCTTGAAGG CAAAAGAAGG GAAGTCTCCA CTGTCCCCTA ATGGCTTGCT ATCTCAGCTA CAGAATATTG GAATCTTTCT TGGGAATGGC AAGGAAGAAG ATGCACATGA ATTCCTTAGG TTTGTTGTCG ATACACTGCA GTCCGTGTGC ATTAAGGCAT CTGAATATGA TATGCCCAAG AGTAGCAAAT TAGAAGATAC AACTCTTATT GGTTTGACAT TTGGGGGATA CCTCCGATCA AAGATTAAAT GCATGAAATG TCAAGTAAAA TCTGAGCTGC GTGAGAAAAT GATGGATCTA ACGGTTGAGA TTGATGGAGA TATTAGCACC CTGGATGATG CTTTGCGTCG ATTTACAAGG ACTGAGATAT TGGATGGAGA CAACAAATAC AGATGTGGCA GCTGTAAATC CTATGAGAGA GCCAAAAAGA AGCTGAAAAT TACAGAACCT CCGAATGTCC TTACCATTGC ACTAAAACGA TTCCAGGCAG GGAAATTCGG GAAGCTCAAT AAGTTGATCA GGTTTCCAGA AACTCTAGAT TTGGCTCCAT ATGTCAGCGG GGGAAGTGAA AAATCACATG ACTACAAACT CTATGGAGTT ATTGTTCACT TGGATATAAT GAATGCAGCA TTTTCTGGCC ACTATGTCTG CTATATTAGA AATCAAAATA AGTGGTACAA GGCTGATGAT AGCACGGTAG TAACTTCGGA TGTTGAAAGG ATCTTGACAA AGGGAGCGTA TATGTTGTTC TACGCAAGGT GCACTCCAAT GCCTCCAAAA TTAGCAGTAT GTACCAAAAC TGAAGCATCC AACAAAAGAA GCAGAGTGCC AGTACCTAAG GCTAAAGAGA AAAGTACCAT ATCCATGTCA CGGTCTGTGT CTACTTCAAG TCCTGTTTTG TCTTCCAACA CGCCCGGTGG TCGATCTGGC AATATACAGT CATTTTATTC CAGTTTCCAG AGGCTGCAGA AAATTTTAGA AGATGACTCG GCGAGTGACA GTTCATCTCT CTTTGACAGC AACTCAGATG AATGCTCTTG TAGCACAGAC AGTACAAGCA TGGACGACTT TGCTGATTTC ATTTTTGGAG ATCATCAGGG ACGGGCCCAC GGACAGTCTG AGGCTCCCTC ACCAACATCA TCGTCTTCCT CGTCTTCTCC TCCCTTCACA AGGCATTCGC CGCTCAGTCG TTCATCTCTA GAAACTTACG GAACCTCAAG ACATCAGTTG CCCTTGGGAG GAGAAAGGTA AGGGAAACAA CGATGGTTTT TTGTCCACTG GCCCCAACTA AGTCAAATTA GTAGAAGAAA GTAGATTTGA TTACATGTAG ATGGAGTGGT TTTATTAACA ACCCGTATTT AGGCTTGGTG AAAGTGGTTA ACGAGAGAAC TGGTGGTATA TAGTAGTGTA TAGTGGGGAA GAGAGATTTT GCCCATGAAA TTGTATCACG TAATGGAACG GAATTTACCT TTGTTAATAA GTTGTTTTGA CTTTTATTAT AATCAATCAA TAAAGCTAAG CTAA |
| Length | 3684 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 7007593.. 7012085 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G24560.1 |
| Description | ubiquitin-specific protease 16 |
| TAIR curator summary | Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. |
| Alias | [UBP16][ubiquitin-specific protease 16] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg488829 | Telomerase activating protein Est1 |
| 9.05539 |
Ahg919763 | Leucine-rich receptor-like protein kinase family protein |
| 12.49 |
Ahg481592 | Protein of unknown function (DUF630 and DUF632) |
| 13.4164 |
Ahg475328 | aminophospholipid ATPase 3 |
| 14.7309 |
Ahg334149 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| 15.4919 |
Ahg488817 | ARM repeat protein interacting with ABF2 |
| 15.4919 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 17.4356 |
Ahg487868 | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related |
| 19.6469 |
Ahg489637 | DNA-binding storekeeper protein-related transcriptional regulator |
| 19.8997 |
Ahg479149 | TOPLESS-related 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|