Detail



ID : Ahg490777

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490777|fgenesh2_kg.7__210__AT4G39910.1
Sequence
CTCTTCTCTT CGGCTCCTTG GAAATCTGAA TTATCCGATC GAATCGAACC ATCGCAGAGG CTAAAGAAGA GGTTTGAGTC AAATCGGACG AGTCAGGATC AGAAAAAACG GTGATACGGA AGCTAGTTCT AGGGCTAATG GGCGCCGCGG GCTCCAAACT CGAGAAAGCT CTCGGCGACC AGTTCCCCGA AGGAGAACGC TACTTTGGAT TCGAGAATTT CGGCAACACT TGCTACTGTA ACAGCGTTTT GCAGGCTCTT TATTTCTGTG TTCCTTTCCG TGAACAATTG CTTGAATACT ATACCAGTAA TAAAAGCGTC GCCGATGCTG AAGAGAATCT TATGACCTGC CTGGCAGACT TGTTTTCGCA GATAAGTTCC CAGAAGAAGA AAACTGGTGT TATTGCGCCT AAGCGATTTG TACAGAGGTT GAAGAAACAA AATGAGCTGT TTCGGAGCTA TATGCACCAG GATGCACATG AATTCCTGAA TTATTTGCTG AATGAAGTTG TTGACATACT GGAGAAAGAG GCAAAAGCTA CAAAAACTGA ACATGAAACC TCGTCATCAT CATCTCCCGA AAAGATTGCA AATGGACTGA AAGTTCCTCA GGCAAATGGT GTTGTGCACA AAGAGCCTAT TGTTACTTGG GTGCACAATA TTTTTCAGGG CATACTTACC AACGAGACAA GGTGTCTGCG ATGTGAAACA GTGACAGCAA GAGACGAAAC ATTCCTAGAC CTAAGCCTTG ATATTGAACA GAACAGTTCG ATAACTAGCT GTTTGAAAAA CTTCAGCTCC ACAGAGACGC TTCACGCTGA AGACAAATTC TTTTGTGACA AATGCTGCAG CTTACAAGAA GCACAGAAAC GAATGAAGAT CAAGAAGCCA CCACACATCT TAGTCATCCA TCTAAAGCGA TTCAAATACA TCGAACAGCT AGGCCGCTAC AAGAAGCTCT CATATCGAGT TGTCTTCCCT TTGGAGCTAA AACTGAGCAA CACAGTGGAA CCATACGCAG ACGTGGAGTA CTCTCTGTTT GCAGTGGTGG TTCATGTCGG AAGTGGACCT AACCATGGTC ACTACGTCAG CCTTGTGAAA AGCCATAACC ATTGGCTCTT CTTTGATGAT GAGAATGTTG AGATGATTGA AGAATCAGCT GTTCAAACAT TCTTTGGATC GTCTCAGGAG TATTCAAGCA ATACTGATCA TGGTTACATC CTGTTCTATG AGAGCCTTGG ACCGACCAAG TAAAAGCTGA GAAAGCAGAA AAAATGACTT TCTTCGTTTT TTTTTCTTTA ACTATTATTA GTAATGGTAT ATGTTTGTCT TTAAAAGTAA ACTCAATTGA CAGTAACTTT TTTTTTTTTT TTTCTCTCTG TCTCTCTCTC TCTCTCCCAG AGATATTTGG TGAGTTTTAA ATTGGAAGTT TTAACTGGAA TTTGTATACT TTGAAAAAGG CCATGTACAG TTTATGGCAA ATAACTTCCC TTGTCTTTGT ATCCTTTAGC AAGGAAGAAG ATAACAATAT GTT 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_7: 771965.. 774609
Download Sequence
A.thaliana
AGI-codeAT4G39910.1
Descriptionubiquitin-specific protease 3
TAIR curator summaryEncodes a nuclear ubiquitin-specific protease.
Alias[ATUBP3][UBP3][ubiquitin-specific protease 3]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg488313 Protein kinase superfamily protein
3.87298 Ahg479742 Endoplasmic reticulum vesicle transporter protein
4.47214 Ahg930843 DNAJ heat shock N-terminal domain-containing protein
6 Ahg481753 AAA-type ATPase family protein
11.6189 Ahg491063 phospholipase D delta
12.2474 Ahg946473 RAB GTPase homolog 1C
12.6491 Ahg475472 alpha-1 tubulin
13.1149 Ahg491031 armadillo repeat only 3
13.4907 Ahg492396 RAB geranylgeranyl transferase alpha subunit 1
13.6382 Ahg478777 galacturonosyltransferase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression