Detail



ID : Ahg475472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475472|fgenesh2_kg.2__602__AT1G64740.1
Sequence
TTGTCCTTTC ACATCTAAAA GCGGGAGACC CAACAACAAC CATCTTCCTC GTGAAAACAG AGAGAAAGAG GAAGAAGAAC AGGTCCCTGA GAAATATTCG AACATGAGGG AGATCATTAG CATTCATATC GGACAAGCTG GTATTCAGGT TGGAAATTCT TGTTGGGAGC TTTATTGTCT CGAACATGGT ATCCAACCCG ATGGCACCAT GCCCAGTGAT AGTACTGTGG GTGTATGTCA TGATGCATTC AACACATTCT TTAGCGAGAC AAGCTCAGGC CAACATGTTC CTCGGGCTGT GTTTCTTGAT CTCGAACCAA CCGTCATTGA TGAAGTAAGA ACCGGCACTT ACAGACAGCT TTTCCATCCC GAGCAACTTA TCTCTGGCAA AGAAGATGCA GCCAATAACT TTGCTAGAGG CCATTACACT GTTGGAAGGG AAATTGTTGA CACCTGCCTT GAAAGGCTGA GGAAATTGGC AGACAATTGC ACAGGGTTAC AAGGATTTTT GGTGTTTAAT GCTGTTGGGG GTGGAACAGG TTCTGGTTTG GGTTCTTTAC TGTTGGAGCG CTTGTCCGTA GATTTTGGAA AGAAATCTAA ACTCGGTTTC ACCATATACC CTTCTCCTCA GGTTTCTACA GCAGTTGTAG AGCCATATAA CAGTGTTCTC TCGACTCATT CTCTTCTCGA ACACACAGAT GTTGTTGTTC TTTTGGACAA TGAAGCCATA TACGATATCT GCAGGAGATC TTTAGACATT GAGAGGCCTA CGTACACCAA TCTGAACCGC TTGATCTCCC AAACCATCTC TTCGCTTACA ACTTCTCTGA GATTTGACGG TGCCATCAAC GTGGACATCA CGGAGTTCCA GACCAACCTT GTACCTTACC CTCGGATCCA CTTCATGCTC TCCTCTTATG CACCTGTGAT TTCATCTGCA AAGGCCTACC ATGAGCAGTT CTCAGTCCCT GAGATCACGA CTTCTGTCTT TGAACCCTCC AATATGATGG CCAAATGTGA CCCAAGGCAT GGGAAGTACA TGGCTTGCTG TTTGATGTAT CGTGGTGATG TTGTGCCTAA GGATGTCAAT ACAGCCGTTG CTGCCATCAA AACCAAGCGA ACAATTCAGT TTGTTGACTG GTGCCCAACT GGATTCAAAT GCGGAATAAA CTACCAGCCG CCTTCAGTTG TTCCAGGTGG TGACCTGGCG AAGGTTCAAC GAGCAGTTTG CATGATCAGC AACAATACTG CAGTGGCGGA AGTGTTCTCT CGCATAGACC ACAAGTTTGA TCTCATGTAC TCCAAAAGAG CATTTGTCCA TTGGTATGTA GGTGAAGGCA TGGAAGAAGG AGAGTTCTCT GAGGCCCGTG AGGATCTTGC TGCTCTTGAG AAAGATTATG AGGAAGTTGG TGCAGAAGGA GCAGAGGATG ACGACGAAGA AGGCGATGAG TATTAGAAAG ACACAAGAGT GGTTTTCCAT TGTTTCTTTC TTGTGACATA CAGCAACTAT GTCTATGTGA ATGTGATCTC TACAGTTATT TTGTGATGTT TTACGGGTCT CTCCCCTTTT ATTTCTCATG TGTGTTTGCT AATGGATTGC ATTTATAGTG CATCTCAATA CAAAGTTTGA AGGATTA 
Length1637
Protein Sequence
Protein Residue
Map Locationscaffold_2: 6821116.. 6823659
Download Sequence
A.thaliana
AGI-codeAT1G64740.1
Descriptionalpha-1 tubulin
TAIR curator summaryalpha-tubulin expressed primarily in stamens and mature pollen
Alias[TUA1][alpha-1 tubulin]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg471407 phosphoenolpyruvate carboxylase-related kinase 1
2.44949 Ahg491464 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
4.89898 Ahg486936 HEAT repeat-containing protein
5.65685 Ahg915958 Eukaryotic aspartyl protease family protein
6.32456 Ahg487414 ARM repeat superfamily protein
7.81025 Ahg489475 TCP-1/cpn60 chaperonin family protein
8 Ahg490363 Per1-like family protein
9.16515 Ahg486522 3'-5'-exoribonuclease family protein
10 Ahg479149 TOPLESS-related 2
10.583 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression