| Annotation |
|---|
| Description | jgi|Araly1|490928|fgenesh2_kg.7__361__AT4G37120.1 |
| Sequence |
GAAGCTTAAC GATCGTAATA ATCATGGCGA CGGCTTCAGT TGCTTTTAAG TCTAGGGAAG ATCATAGGAA GAAATTAGAA TTAGAGGAAG CTCGTAAAGC TGGTCTTGCT CCTGCTGAGG TCGATGAGGA TGGCAAAGAA ATCAATCCTC ACATACCTGA GTATATGTCA AAAGCTCCAT GGTATCTCAA CTCTGAAAAA CCGAGTTTGA AGCATCAAAA GAATTGGAAA ACTGAACCCG AACTCAAAAA AATATGGTAT GATAGAGGTG CAAAGATCCA TCAAGCCGAA AAATACCGCA AGGGAGCGTG TATAAACTGT GGTGCAATGA CGCACAGTTC TAAAGCATGT ATGGATAGAC CTCGTAAGAT TGGAGCTAAA TACACAAACA TGAACATTGC AGCTGATGAG AAAATCGAGA GTTTTGAACT TGACTATGAT GGCAAGAGAG ACAGATGGAA TGGTTATGAT CCTTCATCCT ACCGTCATGT GGTAGATCGT TATGATGCAA AAGAGGAGGC ACGAAAGAAG TATCTCAAGG AGCAGCAACT TAAGAAACTA GAGGAGAAGA ACAATAATGA AAACGGTGAT GATGCAACCA GTGATGGGGA GGAATACAAT GACGACTTAA GGGTCGATGA AGCCAAGGTT GATGAGAGCA GGCAGATGGA TTTTGCAAAG GTTGAAAAAC GTGTTCGAAC AACTGGTGGT GGTAGCACAG GAACTGTTAG GAATCTGCGT ATCAGAGAAG ACACTGCAAA ATACCTGTTG AATCTTGATG TCAACTCAGC TCATTATGAC CCGAAAACTC GATCCATGCG TGAAGATCCA CTTCCAGATG CAGATCCAAA TGAAAAATTC TATTTGGGAG ATAATCAATA TAGAAACAGT GGCCAAGCTT TGGAGTTCAA ACAGCTAAAC GTCCATTCAT GTGAAGCATT TGACAAGGGA CAGGACATGC ATATGCAAGC GGCTCCTTCC CAAGCTGAAT TGCTCTATAA GAACTTTAAA GTTGCAAAGG AAAAACTAAA ATCTCAGACA AAAGACACAA TCATGGAAAA GTACGGGAAT GCAGCTACCA AAGGTGAAAT TCCGATGGAG CTTTTGCTTG GCCAAAGTGA AAGACAAGTT GAGTATGACA GGGCAGGCAG GATTATAAAG GGACAGGAGG TGATAATTCC AAAGAGCAAA TATGAAGAAG ATGTTCATGC CAACAATCAC ACAAGTGTTT GGGGTTCATG GTGGAAAGAC CATCAGTGGG GATATAAATG CTGCCAGCAG ACCATTCGCA ACAGCTACTG CACAGGTTCT GCTGGAATTG AAGCTGCAGA GGCGTCCCTT GATCTGATGA AGGCTAATAT TGCTCGCAAA GAAGCTTCTA AAGAGAGTCC GAAGAAGGTT GAAGAGAAGA GAATGGCGAC ATGGGGAACC GATATTCCTG AAGATTTGGA ATTGAACGAG GAGGCTCTTG CCAATGCTCT TAAAAAGGAG GATCTAAGTA AGAGGGAAGA AAAAGATGAG AGGAAACGCA AATACAATGT CAAATACACC AACGATGTGA CTTCGGAAGA TATGGAAGCT TATAGAATGA AGAGAGTTCA CCATGAGGAT CCAATGAAAG ATTTCCTCGG CTGATTTAAA CTCTTTCCCT TTCACCATAT TAACCTGAAG AAACCTTATT TTTTAAGTCT TTAAATAAGA GACCTTTCTT ATTCATATCA TTATTTGTTA GTCTTCAAGA TTCATTATGA TTTTAACAAA ACTTATGAAA CTAGAATAAA ATTTCTTAGC CAAATC |
| Length | 1796 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1479213.. 1481828 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G37120.1 |
| Description | Pre-mRNA splicing Prp18-interacting factor |
| TAIR curator summary | Encodes a zinc finger containing protein similar to step II splicing factors that is similar to SMP1. SMP2 is also reduced in SMP1 epigenetic alleles; plants make smaller organs having reduced cell numbers but increased cell size. |
| Alias | [SMP2][SWELLMAP 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg486329 | citrate synthase 2 |
| 11.6189 |
Ahg937652 | phosphate transporter 3;2 |
| 15.4919 |
Ahg471107 | sucrose transporter 4 |
| 17.4356 |
Ahg918552 | Transducin/WD40 repeat-like superfamily protein |
| 18.5203 |
Ahg494831 | eukaryotic release factor 1-1 |
| 18.735 |
Ahg937667 | AMP-dependent synthetase and ligase family protein |
| 19.2614 |
Ahg319921 | Pentatricopeptide repeat (PPR) superfamily protein |
| 20.347 |
Ahg471776 | |
| 21.4942 |
Ahg941635 | sucrose synthase 1 |
| 23.8747 |
Ahg485083 | FTSH protease 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|