Detail



ID : Ahg319921

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319921|fgenesh1_pm.C_scaffold_3002937
Sequence
ATGAAGCATC TTCTCCGGCA ACAATTCAGT AATTTTTTCT GGAAACTTCC TTGCAGACGT TCCTTCGTTC ATTTCCCTAA AACCATTCCT TCACCGGAGC TCATTGATGA CACTCTCAAG CGTCGGATCG AGCGAGTCCA AGATTCGACG GTCTCCATCA CTCCGTTGCT CCGAGAATGG TGCGAACGCG GAAATCAAAC GGCACTTTCA GAACTCAGAA GCATCATCAC CTCTCTTCAC AGATCCAATC GCTTCTTTCA CGCTCTCCAG GTATCGGATT GGATGATTGA ACAAAAAGCT TACAAGCTGA GTTCGATGGA TTTTGAGCGA CGGCTTTACT TGACTGCAAA AGTTTGTGGT GTGGAAGAAG CGGCTAAGTT CTTCGAGACT GTTCCTGCTG AAGATCACGA CATGGTGGTG AAGCTTCTTG GTGAGATGGA CGAGAAAAAG ATGCAACCCC AAGGACTGTC TTTTGACAAG CTTTTAACTT CTTACTCAAT GGCATCTGAT TTAGATGTAC AAGGAATGGA GAAGTTTTTG AGCAAGTGGG AGGTGATGAT TCAGGAAAAA TGGACCACAT TCTACTTTCC AGGATTGGTC TACATACGAG CAGGGTTTAT GGAAAAGGGT TTAGCTTTGC TTCGTAGGTC AGAGCCATCT GTTGGTGACG GCGCTAGAGA AATCATCTAT GGATGTCTCA TGACTGCTTA TTGTAGCGAG AATCTAACAG AGGATGTGTA CCGTCTCTGG AACTTGGCTA AGGACTATGG GATATCCTTT GACAGTTCCA AATGTTCTGA TATCGTCAAG GCGTTTACGA AGAAGGGTGA TCTCGATGAG GTTATGGAAG AGTGGAATGA GTGTCCCAAT ATTGATCTGA TGGATTTTGG TCTCCAACAT AGATGTATGA AGAAGGAGGC TGAGAAGATT GTGGATATGA TTGGGAAGAA GGAGAGCAAA TGGGAGAGTT TGGCACACAA GGTTAATAAT TTGGTGGAGG ATGAAGATGA TAAAGAAGAG GAGAGGAGGA AGAGAGTGGC AGAGGCCATG GAGGGGAGGC TGCATGACCA ATGGAACCCA AAGAGCAGCA TGGCTCTGTC CGCTTATGCC TGCGTGCAAT ATGTGGAGGG TCGGAGAGAC ATGGAGAGTA CAGCCAACAT TCTGAGACTC CTGAACAAGC GAGAGCAAGT GTTGCATGCA ATGGACAAAG ACCGATTGAG CCTGAAGATG GTGGAGGCAA TGAGAGGAGG AGGATACGTT GGTGGAGATG ATTAA 
Length1275
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22635716.. 22642293
Download Sequence
A.thaliana
AGI-codeAT2G20720.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.9615 Ahg936241 Protein of unknown function, DUF617
19.2614 Ahg490928 Pre-mRNA splicing Prp18-interacting factor
24.8998 Ahg352054 Uncharacterised conserved protein UCP009193
27.4591 Ahg486315 sequence-specific DNA binding transcription factors
28.1425 Ahg349525 NAD(P)-binding Rossmann-fold superfamily protein
32.5269 Ahg334015 PHF5-like protein
34.5832 Ahg472130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
49.8397 Ahg486050 prenylated RAB acceptor 1.B1
50.2792 Ahg938598
50.7247 Ahg486115 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression