| Annotation |
|---|
| Description | jgi|Araly1|491032|fgenesh2_kg.7__465__AT4G36020.1 |
| Sequence |
AAAAACCCTA ATTTCTCAAT CTCTTCTTCA ACTTTTTTTT CCCCACGATG GCTTCAGAGG ATCAATCGGC GGTGAGATCT ACCGGGAAGG TTAACTGGTT CAACGATTCC AAAGGCTATG GTTTCATTAC TCCTGAAGAC GGCAGCGAAG AGCTTTTCGT TCATCAATCC TCAATTGTCT CCGAAGGTTA CCGGAGTTTA GCTGAGGGCG ATTCGGTTGA GTTCGCTATT ACTCAGGGAA GCGACGGTAA GACTAAAGCC GTCGAGGTTA CTGCTCTCGG TGGTGGTGCT CTTAAGAAGG AGAATAACTC TCGCGGTAAC GGTGCTAGGC GCGGCGGTGG AAGCGGTTGC TACAATTGCG GTGAGTTAGG TCATATTGGT GGCGGCAGCG GAGGTGGTGA ACGTGGATCT AGAAGAGAAG GTTGTTACAA TTGTGGTGAT GCTGGTCACT TCGCTAGGGA TTGTACTCAG AAATCAGCTG GAAACGGAGA CCAACGTGGA GCAGCCGGAG CTGGAAAAGA TGGTTGTTAC AATTGTGGTG ACATTGGTCA CTTCGCTAGG GATTGTGGTA ATCAGAAAGT GGCTGCTGGA AACGTCAGAA GCGGTGGTGG TAGTGGATCT TGTTATACAT GTGGTGGAGT TGGTCACATT GCAAGAGAGT GTGCGACTAA GAAACAGCCT TCTCGTGGTT GTTACCAGTG TGGTGGTTCT GGTCACTTGG CTCGTGATTG TGACCAGAGA GGAAGCGGTG GAAGCGGTGG TGGTAATAAG TGCTACAGCT GCGGTAAGGA AGGTCACTTT GCAAGGGAAT GCTCTGTGGC TTAAACGATT TCCTAATCAA CAAAAAACAA GAATGAAATT GAATCGAGTA ATATAGTTTG GTATATATTT CTCTTCGTTT TCATTTATCT TTTTTTTTGT TGATGGGAAT GAAATTGCCT GGTCCTTTTG GTGTTTTAGA GGTTTTATTA TTATACAGAG AGTGAATCCC CCTTTTGTTA TAACTATTAC AAGTTTTTAG CTTTATTTGT TTCTCTGATA TGGATGCTCT CTTTTTCTTC TATCTGTTTC TGGAAATTTT GACCTCTTAT TGCTTATGTC ATCTAAAGTT TGAGTTTTGT CCTTTTTATT AAAGTGTTGC TAGTTTCA |
| Length | 1148 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1946679.. 1947845 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G36020.1 |
| Description | cold shock domain protein 1 |
| TAIR curator summary | Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. |
| Alias | [AtCSP1][CSDP1][CSP1][cold shock domain protein 1][cold shock protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.14143 |
Ahg933783 | Ribosomal L27e protein family |
| 10.247 |
Ahg471979 | |
| 16.8523 |
Ahg475376 | Ribosomal protein S5 family protein |
| 21.6795 |
Ahg944275 | Pathogenesis-related thaumatin superfamily protein |
| 27.6225 |
Ahg476579 | Protein of unknown function (DUF793) |
| 29.1548 |
Ahg481943 | Pseudouridine synthase family protein |
| 31.4325 |
Ahg490127 | transducin family protein / WD-40 repeat family protein |
| 31.8434 |
Ahg480759 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 31.9374 |
Ahg914623 | eif4a-2 |
| 33.7639 |
Ahg944342 | mitochondrial ribosomal protein L11 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|