Detail



ID : Ahg914623

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914623|Al_scaffold_0001_4877
Sequence
ATGGCAGGAT CTGCAGCAGA AGGTACACAA TTTGATACGC GTCAGTTTGA CCAGAAGCTG AATGAAGTAC TCGAGGGACA GGATGAGTTC TTCACCTCAT ATGATGAGGT CCATGAGAGC TTTGATGCCA TGGGTTTGCA AGAGAACCTT CTCAGGGGTA TCTATGCTTA TGGTTTCGAA AAGCCTTCTG CTATTCAGCA AAGAGGAATT GTACCCTTTT GCAAGGGTCT TGATGTGATC CAGCAGGCAC AGTCTGGTAC TGGAAAAACC GCCACTTTCT GCTCTGGTGT CTTGCAGCAG CTTGACTATA CCCTTGTCCA GTGCCAGGCT CTCGTTTTGG CTCCCACCAG AGAGCTTGCT CAGCAGATTG AGAAGGTCAT GCGTGCCCTT GGTGATTACC AAGGCGTCAA AGTTCATGCC TGTGTTGGTG GAACCAGCGT CCGTGAGGAT CAGCGCATTC TCCAGGCTGG TGTTCATGTT GTGGTTGGAA CTCCCGGTCG TGTGTTTGAC ATGCTTAGAA GACAATCTCT TCGCCCTGAT TGCATCAAGA TGTTTGTCCT TGATGAAGCT GATGAAATGC TCTCCCGTGG TTTCAAGGAT CAGATCTATG ACATATTCCA GCTTCTCCCA CCAAAGATTC AGGTTGGAGT GTTCTCAGCA ACGATGCCTC CGGAAGCTCT GGAGATCACA AGGAAATTCA TGAGCAAACC AGTGAGAATC TTGGTGAAAC GTGATGAGCT CACACTTGAA GGTATCAAGC AATTCTACGT GAACGTGGAG AAAGAAGAGT GGAAGCTCGA GACTCTCTGC GATCTCTATG AGACTCTAGC CATCACTCAG AGTGTCATCT TTGTCAACAC TCGTCGCAAG GTCGACTGGC TCACAGACAA AATGAGAAGC CGTGACCACA CAGTCTCAGC AACTCATGGA GACATGGACC AAAACACAAG AGACATCATC ATGAGAGAAT TCAGGTCTGG TTCTTCTCGT GTTCTAATCA CGACCGATCT CTTGGCTCGT GGTATTGATG TGCAGCAAGT CTCTCTGGTC ATAAACTTTG ACCTCCCAAC TCAGCCAGAG AATTACCTTC ACCGTATCGG AAGAAGTGGA AGGTTCGGGA GAAAGGGTGT GGCCATTAAC TTCGTGACTC GTGATGATGA TAGAATGCTG TTTGATATTC AGAAATTCTA CAATGTGGTC GTTGAGGAGC TTCCCTCAAA CGTTGCCGAT TTGCTGTGA 
Length1239
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27624665.. 27626175
Download Sequence
A.thaliana
AGI-codeAT1G54270.1
Descriptioneif4a-2
TAIR curator summarymember of eIF4A - eukaryotic initiation factor 4A
Alias[EIF4A-2][eif4a-2]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
11.225 Ahg923232 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative
12 Ahg938186 Aldolase superfamily protein
12.3288 Ahg934284 Enolase
17.8326 Ahg479745 Eukaryotic rpb5 RNA polymerase subunit family protein
17.9444 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
18.9737 Ahg482367 SecY protein transport family protein
22.4944 Ahg336036
23.8747 Ahg492815 small nuclear ribonucleoprotein associated protein B
26.0768 Ahg920619 ubiquitin-specific protease 15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression