Detail



ID : Ahg491169

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491169|fgenesh2_kg.7__602__AT4G34870.1
Sequence
TTTTCAGATT CACCGCTTTA AAAATTAAAT CCTCTCTATA AGAACCTCTC CAAAAATCTT CTTCATCGAT TTCTCTCTTC AAAATCTTCC AGAAAAAATG GCAAACCCTA GAGTTTTCTT CGACATGAGT CTGAGCGGTA CTCCGATCGG TCGGATCGAG ATGGAGCTAT TCGCTGATAC GACCCCAAAC ACGGCGGAGA ATTTCCGTGC TCTGTGTACC GGAGAGAAAG GAATCGGAAA GATGGGTAAG CCACTTCACT ACAAGGGATC GATCTTCCAC CGTGTGATTC CCGGATTCAT GTGTCAGGGA GGTGATTTCA CCGCCAAGAA CGGAACCGGT GGTGAATCGA TCTACGGTGC TAAGTTCAAA GACGAGAACT TTATTAAGAA GCATACCGGA GCTGGGATTC TCTCAATGGC TAACTCTGGT GCTAACACTA ACGGATCTCA GTTCTTCATC TGTACCGATA AGACCTCGTG GTTAGATGGT AAGCACGTTG TGTTTGGACA AGTTGTTAAA GGCTTGGACG TCGTCAAGGC CATTGAGAAA GTTGGATCTG ATTCTGGAAA GACTTCCAAA GTCGTAACCA TCACTGATTG TGGTCAGCTT TCTTAGATCT GAGTGAGTGA CTGAGAGAAA GACCTTATCT TTATGAATAA TTCGTTTCAG AGTTTGTAAC AAGACCCTTT TGTGTTTTCT GGGGTTTTCA AATAATTATA AGCTTACCCA ATTACTGCTT TGTGTTTTTG CTTCTCTGAT GAATAATTGA TTCATGTTCG TAGTAATGAA CAAAAATATA TGCGAATTAT GCAAGACTGA CTAGGAAAAA AGAAGACTTT GTTACACTCA AATCTGTTTA GAAGAAGAAA AAAGATACAA TCTTTTTGAA GAGATG 
Length896
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2434740.. 2435724
Download Sequence
A.thaliana
AGI-codeAT4G34870.1
Descriptionrotamase cyclophilin 5
TAIR curator summarybelongs to cyclophilin family
Alias[ATCYP1][ROC5][ARABIDOPSIS THALIANA CYCLOPHILIN 1][rotamase cyclophilin 5]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg471499 glyceraldehyde-3-phosphate dehydrogenase C2
14.0712 Ahg485014
14.9666 Ahg920010 glyoxalase I homolog
20.8327 Ahg476699 Walls Are Thin 1
21.0238 Ahg485582 dual specificity protein phosphatase (DsPTP1) family protein
23.4307 Ahg481805 outer plastid envelope protein 16-1
32.249 Ahg486818
33.4664 Ahg931277 poly(A) binding protein 2
44.2267 Ahg483146 disproportionating enzyme 2
44.7214 Ahg931489 rotamase CYP 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression