Detail



ID : Ahg931489

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931489|scaffold_303946.1
Sequence
TCAATCTCAG AAAACAAAAA ATGGCACCAA ACCCTAAAGT TTACTTCGAC ATGGCCGTCG GTGGTCAATC AGCTGGTCGT ATCGTGATGG AGCTTTTCGC GGACACAACA CCAGAAACCG CCGAGAATTT CAGAGCTCTC TGTACCGGAG AGAAAGGAAT CGGAAAATCT GGTAAGCCAT TACACTACAA AGGGTCAAGC TTTCACCGTG TGATTCCGAA ATTCATGTGT CAAGGAGGTG ATTTCACCGC CGGGAATGGT ACCGGAGGTG AATCTATCTA TGGACTGAAG TTCAAAGATG AGAACTTTGT CAAGAAACAT ACAGGACCAG GTATTTTGTC TATGGCTAAC GCTGGTGCCA ACACTAATGG ATCTCAGTTT TTTATTTGTA CTGAGAAGAC TTCATGGCTC GATGGGAAAC ATGTTGTGTT TGGTCAAGTT GTTGAAGGAT TGAATGTTGT TAGAGATATT GAAAAGGTTG GATCTGACTC TGGAAGAACT TCTAAGCCTG TTGTTATTGT TGATTGTGGT CAGATTTCTT AGATCTCTCT GAGAGAGAGA GA 
Length562
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5398537.. 5399099
Download Sequence
A.thaliana
AGI-codeAT2G16600.1
Descriptionrotamase CYP 3
TAIR curator summaryEncodes cytosolic cyclophilin ROC3.
Alias[ROC3][rotamase CYP 3]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg471553
4.79583 Ahg491159 subtilisin-like serine protease 2
5.83095 Ahg485074 alpha-glucan phosphorylase 2
6 Ahg944922 Low temperature and salt responsive protein family
7.74597 Ahg472949 adenine phosphoribosyl transferase 1
8.48528 Ahg921160 PDI-like 1-1
9.21954 Ahg471499 glyceraldehyde-3-phosphate dehydrogenase C2
9.64365 Ahg919881 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
9.69536 Ahg931277 poly(A) binding protein 2
9.8995 Ahg943887 Sec14p-like phosphatidylinositol transfer family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression