Detail



ID : Ahg491252

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491252|fgenesh2_kg.7__685__AT4G34200.1
Sequence
ACTCCGCCAC CAACAACAAT TTTCTCTACT CATTCACTCA CACATTCACT ACTCCATAAG CGGTAGCAAT GTCAGCCACC GCCGCCGCCG CTTCCTCGAT CTCCGTCGCC ACCAATTCTC TCAAAAACGT CACTCTCTCT TCCAGATCGC CTCTTCCATC AGCCATCTCC GTCGCTTTCC CTTCTCGTGG ACGCAATACT CTTCAGAGAC GGCTCGTTCT CGTTTCGTGC AGTGCTGGAG ATGGATCTAA GCCTACGATT CTCGTGGCGG AGAAGCTCGG TGAGGCTGGT GTAAAGCTCT TGGAGGATTT TGCGAATGTC GACTGTTCGT ATAACATGAC TCCTGAGGAG CTCAACACTA AGATCTCGCT ATGTGATGCG TTGATCGTGA GGAGTGGGAC TAAGGTTGGC CGTGAGGTGT TTGAATCGTC TCGCGGACGG CTCAAGGTTG TTGGACGCGC TGGTGTTGGG ATCGACAACG TGGATCTGAG TGCAGCGACG GAGTTTGGGT GTTTGGTTGT CAACGCTCCG ACGGCGAACA CGATCGCTGC TGCTGAGCAC GGAATCGCTC TTATGGCGGC CATGGCTAGG AACGTTGCTC AAGCTGATGC GTCTGTGAAG GCTGGAGAGT GGAAGAGGAA CAAGTATGTG GGTGTTTCAC TTGTGGGCAA GACCCTTGCA GTGTTGGGAT TCGGGAAAGT TGGGACGGAA GTTGCTAGAC GTGCCAAGGG TCTTGGTATG CGTGTCATTG CTCATGATCC CTATGCCCCA GCAGACCGTG CACACGCCAT TGGTGTTGAC TTAGTGAGCT TTGATGAAGC CCTTGCGACC GCGGATTTCA TTTCTCTGCA CATGCCTCTT ACGCCAACAA CATCGAAGAT ACTCAACGAC GAAACCTTTG CCAAAATGAA GAAAGGAGTT CGCATTGTCA ATGTTGCTCG TGGAGGTGTC ATAGACGAAG ATGCGTTAGT GAGAGCTCTG GATTCTGGCA TTGTTGCTCA GGCTGCACTT GATGTCTTCA CCAAAGAGCC GCCGGCTAAA GATAGCAAGC TCGTGCAGCA CGAGAGGGTC ACTGTGACTC CTCATCTTGG AGCCAGTACC ATGGAGGCGC AGGAAGGAGT TGCCATCGAA ATTGCTGAAG CTGTTGTTGG AGCTCTGAAT GGAGAGCTTG CTGCTACAGC TGTCAATGCA CCTATGGTTT CTGCTGAGGT TCTAACCGAG TTGAAACCAT ATGTGGTACT AGCCGAGAAA CTAGGAAGAC TGGCAGTGCA ATTGGTGGCC GGAGGAAGCG GTGTGAAAAA CGTGAAAATC ACATACGCCT CAGCAAGAGC CACTGATGAT CTTGACACCA GACTTCTACG AGCCATGATC ACCAAGGGAA TTATCGAGCC AATCTCTGAC GTCTATGTCA ATTTGGTCAA CGCTGATTTC ACAGCCAAGC AGAGAGGTCT TAGACTCTCA GAGGAACGTG TGCTCTTGGA TGGTTCACCA GAGAGCCCGT TGGAGACAAT AACTGTTCAG CTAAGCAATG TGGAGTCTAA ATTCGCCAGT TCGTTGTCTG AATCAGGAGA GGTCAAAGTG GAAGGAAGGG TTAAAGACGG AGTCCCACAT TTGACAAAGG TTGGATCTTT TGAGGTCGAT GTAACTCTTG AAGGTAGTAT CATACTGTGC AGGCAGGTGG ATCAACCTGG TATGATCGGG ACAGTCGGAA GCATCCTTGG AGAGTCTAAT GTGAATGTTA ACTTCATGAG CGTTGGGAGG ATTGCACCGA GGAAGCAAGC GATTATGGCT ATCGGAGTAG ATGACATACC AAGCAAAGAT ACACTGAAGA AGATTGGGGA AATTCCAGCG ATTGAGGAGT TCGTTTTCCT CAAGCTCTAG TTTGGTGTGT TGTTGATTCT TGAATCTTAA ATCTCACCGG TGAAGATTTG ATGTTGTTTG TTGGTTTAGG CAATAATGTT ATGTTGGCTT TCTACAGTTT TGGTAACGTT GAGAGTAGTG GTCTCTTTGA TGTTTCAACT TTATGGTTT 
Length2029
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2710476.. 2713207
Download Sequence
A.thaliana
AGI-codeAT4G34200.1
DescriptionD-3-phosphoglycerate dehydrogenase
TAIR curator summary
Alias[EDA9][embryo sac development arrest 9]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg941643 TCP-1/cpn60 chaperonin family protein
12.9615 Ahg949805 MATE efflux family protein
13.3041 Ahg947029 S-adenosyl-L-homocysteine hydrolase
23.8747 Ahg944003 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1
24.3721 Ahg471063 Translation elongation factor EF1B, gamma chain
27.4955 Ahg491084 phosphoserine aminotransferase
29.8998 Ahg930609 Ribosomal protein L13 family protein
32.1248 Ahg478929 Lactate/malate dehydrogenase family protein
32.45 Ahg915255
32.7109 Ahg487374 anthranilate synthase alpha subunit 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression